KEGG   Panicum virgatum (switchgrass): 120675943
Entry
120675943         CDS       T07260                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3-like
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03020  RNA polymerase
pvir03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    120675943
  09124 Replication and repair
   03420 Nucleotide excision repair
    120675943
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pvir03021]
    120675943
   03400 DNA repair and recombination proteins [BR:pvir03400]
    120675943
Transcription machinery [BR:pvir03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     120675943
DNA repair and recombination proteins [BR:pvir03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      120675943
SSDB
Motif
Pfam: RNA_pol_A_bac
Other DBs
NCBI-GeneID: 120675943
NCBI-ProteinID: XP_039813078
LinkDB
Position
5N:complement(55733801..55736052)
AA seq 177 aa
MSTSSVLSDEFIAHCLGLIPLTSAAAMQMRFSRDCNVCDGDGFCEYCSVEFLLSARATDS
DQTLEVTSNDLRSADPKVCPSTRLAPSSRRSINTDFEPNAGEQRGILTVKLNRGQELRLH
SIARKGIGKDHAKWSPAATVTFMYEPDIDTLALDEKRSWVESSPTKVFHLDPITKQY
NT seq 534 nt   +upstreamnt  +downstreamnt
atgtcaacttcctccgtcctcagcgacgagttcattgcgcactgcctggggctcatcccc
ctcacctccgccgccgccatgcaaatgcgcttctcccgggactgcaacgtttgcgacggc
gacggcttctgcgagtactgctccgtcgagttcctcctctccgcgcgtgccaccgactcc
gaccagacgctcgaggtcacatccaacgacctgaggtccgccgaccccaaggtctgcccg
tcgaccagactcgcacctagcagcaggcgctcaatcaacactgacttcgagcccaacgct
ggggagcagaggggaatacttactgtaaagctgaatcggggtcaagaactgaggcttcat
tccattgctaggaaaggaatcggcaaggaccatgccaaatggtcaccagctgctaccgtg
actttcatgtatgagcctgacatcgatacattggcgcttgatgagaaaagaagttgggta
gaaagcagccctacaaaagtatttcaccttgatcctattaccaaacagtactga

DBGET integrated database retrieval system