Panicum virgatum (switchgrass): 120676315
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Entry
120676315 CDS
T07260
Name
(RefSeq) tubulin beta-5 chain
KO
K07375
tubulin beta
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04145
Phagosome
pvir04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120676315
09142 Cell motility
04814 Motor proteins
120676315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120676315
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pvir04812
]
120676315
04147 Exosome [BR:
pvir04147
]
120676315
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
120676315
Cytoskeleton proteins [BR:
pvir04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
120676315
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120676315
Exosomal proteins of colorectal cancer cells
120676315
Exosomal proteins of bladder cancer cells
120676315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
Tubulin_2
Misat_Tub_SegII
Motif
Other DBs
NCBI-GeneID:
120676315
NCBI-ProteinID:
XP_039813485
LinkDB
All DBs
Position
5N:16283302..16287710
Genome browser
AA seq
445 aa
AA seq
DB search
MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASCGRFV
PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM
CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPCG
LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATADEEGDYEDEEVIQDE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgagggagatcctccacatccagggcggccagtgcggcaaccagatcggctccaagttc
tgggaggtggtgtgcgacgagcacggcatcgaccccaccggccgctacgtcggcacctcc
gatctccagctcgagcgcgtcaacgtctactacaatgaggcctcatgcggccgcttcgtg
ccgcgcgccgtgctcatggacctcgagcccggtaccatggacagcgtccgcaccgggccc
tacggccagatcttccgccccgacaacttcgtcttcggtcagtctggtgctgggaacaac
tgggccaagggccactacactgagggagctgagcttatcgactccgtgcttgacgtcgtg
aggaaggaggctgagaactgcgattgtctccaaggcttccaagtgtgccattcccttgga
ggaggcactggatctggaatgggcactcttcttatctcaaagatcagggaggagtaccct
gataggatgatgctcacattttctgtcttcccttcgcctaaggtgtcagatactgttgtt
gagccatacaatgcaacattgtctgtgcatcagttggtggagaatgcggatgagtgcatg
gttcttgacaatgaggctctttatgacatttgtttccgcactctgaagctaaccactcct
agctttggagacctgaatcacttgatcagtgcgacaatgagcggtgtcacttgctgcctc
cggttcccaggacagctgaactctgaccttcgcaagcttgcagtcaacttgattcccttc
cctcgtctccacttcttcatggtcggctttgcgccactcacctcgcgtggctcgcagcag
taccgtgccctcactgtccctgagctgacccagcagatgtgggatgccaagaacatgatg
tgtgctgctgacccgcgccatggccgctacctcacagcctctgccatgttccgtggcaag
atgagcaccaaggaggtggacgagcagatgatcaatgtccagaacaagaactcttcctac
ttcgtggagtggatcccaaacaatgtcaagtccagcgtctgtgacatcccaccgtgtggc
ctctccatggcctccaccttcatcggcaactccacctccatccaggagatgttccgccgt
gtgagcgagcagttcactgctatgttcaggaggaaggctttcttgcattggtacaccggt
gagggcatggatgagatggagttcactgaggctgagagcaacatgaatgacctggtgtcc
gagtaccagcagtaccaggacgccactgcggacgaggagggcgactatgaggacgaggag
gtgatccaggacgagtaa
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