KEGG   Panicum virgatum (switchgrass): 120676482
Entry
120676482         CDS       T07260                                 
Name
(RefSeq) sphingosine-1-phosphate lyase
  KO
K01634  sphinganine-1-phosphate aldolase [EC:4.1.2.27]
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir00600  Sphingolipid metabolism
pvir01100  Metabolic pathways
Module
pvir_M00100  Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09100 Metabolism
  09103 Lipid metabolism
   00600 Sphingolipid metabolism
    120676482
Enzymes [BR:pvir01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.2  Aldehyde-lyases
    4.1.2.27  sphinganine-1-phosphate aldolase
     120676482
SSDB
Motif
Pfam: Pyridoxal_deC Aminotran_5 Aminotran_1_2 NifW
Other DBs
NCBI-GeneID: 120676482
NCBI-ProteinID: XP_039813721
LinkDB
Position
5N:12343925..12360140
AA seq 535 aa
MEAAAELALRLRAAANARLARYEPLALAAAPLLALLVARLAHAAASAVADRGLVAIAIAA
VKLLPGVSSYIAAEKKKVVDKMQSGGTSSKNNRRTELPTIGLGEEVIKDLETLKAKDVDW
QGKCSGTVYIAGSESEGHFELINKAYSMFSHTNPLHQDVFKSVAHMEAEVVAMTAALLGS
KEKSSGGQICGNMTSGGTESILLAVKTSRDYMRSKKGITKPEMIIAESAHSAYDKAAEYF
NIKVRRVPVNKEFLADVKGFKRCINGNTIMMVGSAPGFPHGLIDPIEELGELASRYDICL
HVDLCLGGFVLPFARKLGYPIPPFDFSVKGVTSISSDVHKYGLAPKGTSVVLYRNHEIRK
HQFVAVTEWTGGLYISPTIAGSRPGGLIAGAWAAMMSMGLNGYLDSTSHIMEVSKKIQRG
IEEIPGLYVIGKPDMTVVAFGSDVVDIFEVNDIMSSKGWHLNALQRPNSLHICVTLQHTT
VYGEFLKDLQDSVNTVKANPGPISGGMAPIYGAAGKMPDRGTVRELLVEFMDSSC
NT seq 1608 nt   +upstreamnt  +downstreamnt
atggaggcggcggcggagctggcgctgcgcctccgggcggccgccaacgcccgcctcgcg
cgctacgagccgctggcgctcgccgccgcgccgctcctcgcgctcctcgtcgcccgcctc
gcccacgccgccgccagcgccgtcgccgaccggggcctcgtcgccatcgccatcgccgcc
gtcaagttgctgccgggagtctccagctacatcgcggcggagaagaagaaggttgttgac
aagatgcaatctggtgggacatcgtccaagaacaaccggcgaactgagttgccgacaatt
ggccttggtgaggaagtgataaaggatcttgaaacattgaaagccaaagatgtagactgg
cagggaaagtgctctggcacagtatatatcgctggaagtgagtctgagggccatttcgaa
ttgataaacaaagcttactctatgttttcacacaccaatccgctgcatcaagatgtattc
aagagtgtggcacacatggaagctgaagtagttgcaatgacagctgctttgcttggcagc
aaagaaaaatcatccggtggacaaatttgcggcaacatgacatctggtggaactgaaagc
atattattagcagtcaaaacatcgcgcgactatatgcgatcaaagaaaggaattacaaag
cctgaaatgataattgctgaatcagcacattctgcatatgacaaggctgctgaatatttc
aatattaaagtgcgccgtgtgcctgtgaacaaagagtttcttgcagatgtgaaaggattc
aagcgatgcataaatggaaacaccataatgatggttggatctgcaccaggatttccgcat
ggtttaatcgatcctattgaggaattgggggaactggcttcacgctatgacatttgcttg
catgttgatttatgccttggtggcttcgtattgccttttgcccgtaagcttgggtaccct
attcctccttttgatttttctgtcaagggtgttacgtcaatctcatcagatgttcacaag
tacggattagccccaaagggcacaagtgttgtcctgtacagaaatcatgaaattagaaag
catcaatttgttgctgtaaccgagtggaccggcgggctttatatttctcccactattgct
ggaagcaggccaggtggattaattgcaggagcctgggctgctatgatgtctatgggactg
aatggctacttggacagtacaagtcatatcatggaagtttcgaagaaaatacaaagaggg
attgaagagatcccaggactgtatgtgattgggaaaccagacatgaccgttgtggcattt
ggctcagatgttgtcgacatatttgaggtgaatgacataatgtcgtcgaaaggttggcac
cttaatgctctgcagagacctaacagtttacacatttgcgtgaccctccaacacacgact
gtttacggggagttcctgaaggacctgcaagattctgtgaacactgtgaaagcaaacccg
ggccctatcagcggggggatggctcctatctacggtgccgcagggaagatgccggacaga
ggcacggtgagggagcttcttgtggagttcatggacagctcttgctaa

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