KEGG   Panicum virgatum (switchgrass): 120678675
Entry
120678675         CDS       T07260                                 
Name
(RefSeq) lysine-specific demethylase JMJ30-like isoform X1
  KO
K24444  [histone H3]-dimethyl/trimethyl-L-lysine36 demethylase [EC:1.14.11.27 1.14.11.-]
Organism
pvir  Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pvir03036]
    120678675
Enzymes [BR:pvir01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     120678675
Chromosome and associated proteins [BR:pvir03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    120678675
SSDB
Motif
Pfam: Cupin_8 JmjC_2
Other DBs
NCBI-GeneID: 120678675
NCBI-ProteinID: XP_039815888
LinkDB
Position
6N:complement(47292988..47299463)
AA seq 483 aa
MATGGGEKRAELLRRITEEGGFAFVASAEKAAAGDVRAAEAAREMAWEQLHSAPRDEVGA
AWRDAYALACLHVAAPRGAGGGGDDDRRAALRALDMGLIMGGGLLRAELEDAIARVVADR
RGGDCEAAAAAGDVERWKEGIAGDGDLADVLKLLPVKSLSRKKIERRSCIPLEAFIRDYF
IREAPVILSGCIDHWPARTKWKDIKYLERIAGDRTIPVEVGKNYACTEWKQELITFSQFL
ERMWSSDSANLTYVAQHPLFDQIKELRGDITVPEYCSAGGGELQSINAWFGPHGTLTPLH
HDLHHNLFAQVLGRKYFRLYPASVSVELYPQTETILSNTSQHGGSMLKGHMTLKLNWMPK
AKVDLDNFDETEFPKAADLEFMDGILEEGDLLYIPPKWWHYMSYGADHLFYLAVDLTFVI
ICDRALTANCTVHNKYSKTIFRESVTVIWIWMTCVFIWDSPKQVKGKGNASHTNLQPNCT
SLS
NT seq 1452 nt   +upstreamnt  +downstreamnt
atggccaccggcggcggggagaagcgggcggagctgctgcggcggatcacggaggagggc
ggcttcgcgttcgtggcgtccgcggagaaggcggccgcgggggacgtccgcgcggccgag
gcggcgcgggagatggcgtgggagcagctgcactcggcgccccgggacgaggtgggcgcc
gcgtggcgggacgcctacgcgctcgcctgcctccacgtggccgccccccgcggcgccggc
ggcggcggcgacgacgaccggcgcgccgcgctccgggcgctcgacatgggcctcatcatg
ggcgggggcctcctccgcgcggagctcgaggacgccatcgccagggtcgtcgccgaccgc
cgcggcggggactgtgaggcggcggccgcggcgggggacgtggagaggtggaaggaaggg
atcgcgggggacggagaccttgccgatgtactcaaacttctacctgtgaagtccctatcg
cgtaagaaaatagagaggcgatcatgcattcctttggaggcatttatacgtgattacttt
atacgtgaggcccctgttatactcagtggctgcattgatcattggcctgcaaggacaaaa
tggaaggacataaaatacctagagaggatagctggagatcgtactattcctgttgaggtt
ggaaaaaattatgcttgtactgagtggaaacaggagcttatcacattttctcaatttctt
gagaggatgtggtcgagtgattcagcaaacctgacatatgtagcacagcatccattgttt
gaccagataaaggagctccgcggagacattacagttcctgagtactgttctgctggcggt
ggcgaactccagtcaattaacgcttggttcggccctcatgggaccctgaccccactgcat
catgacctacatcacaacctttttgctcaggttttgggaaggaaatattttagactttat
cctgcttctgtatctgtggaactgtaccctcagacagagacaatattaagcaatactagt
cagcacggagggagtatgctaaagggacatatgactctaaaacttaattggatgccaaaa
gcaaaggtagatcttgacaattttgacgaaacggaattcccgaaggcagcagatcttgaa
ttcatggatggcatattggaggaaggtgacctgctttacattccaccaaaatggtggcat
tacatgagctatggagcagatcatttgttttacttggctgtggatttaacttttgtaatt
atttgtgatagagcactaaccgctaattgtactgtccataataagtactcgaaaacaatt
tttagagaatctgtgacagttatatggatttggatgacatgtgtattcatatgggactct
ccgaaacaggtaaaagggaaagggaatgcttcacatacaaatttacagcccaattgtaca
agtttgtcatga

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