Panicum virgatum (switchgrass): 120679028
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Entry
120679028 CDS
T07260
Name
(RefSeq) probable gamma-aminobutyrate transaminase 3, mitochondrial isoform X1
KO
K16871
4-aminobutyrate---pyruvate transaminase [EC:
2.6.1.96
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00250
Alanine, aspartate and glutamate metabolism
pvir00650
Butanoate metabolism
pvir01100
Metabolic pathways
Module
pvir_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
120679028
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
120679028
Enzymes [BR:
pvir01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.96 4-aminobutyrate---pyruvate transaminase
120679028
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Motif
Pfam:
Aminotran_3
Aminotran_1_2
Motif
Other DBs
NCBI-GeneID:
120679028
NCBI-ProteinID:
XP_039816449
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Position
6N:complement(11777692..11782979)
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AA seq
508 aa
AA seq
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MIARGLLRSSAAASQFSRLVKYVATAGSLQGTHNFAEEPARYYSSEPSLQEIEENGFKGH
SMLAPFTAGWQSTDLHPLVIERSEGSYVYDINGKKYIDALAGLWCTALGGNEPRLVKAAT
EQLNKLPFYHSFWNRTTKPSLDLANEILSMFTAREMGKVFFTNSGSEANDSQVKLVWYYN
NALGRANKKKFIARSKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRFRLSD
ETEEEFSTRLANNLENLILKEGPETIAAFIAEPVMGAGGVILPPKTYFEKIQAVLKKYDI
LLIADEVITAFGRLGTMFGCDMYNIKPDLVSIAKALSSAYMPIGAILVSPEITDVIYSQS
NKLGSFSHGFTYSGHPVSCAVAIETLKIYKERNIVEHVNKIAPRFQEGIKAFSGSPIVGE
IRGQGLILGTEFVDNKSPNDPFPAEWGVGSIFGAECEKRGMLIRVAGDSIMLSPPLIMTP
EEVEEIIIKFGHALKATEERIAELKSKN
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcccgcggcctcctcagatccagtgccgccgcctcgcagtttagtaggctggtg
aaatatgtagctactgctggaagcttgcaaggaacacacaattttgcagaggaacctgcc
agatactacagctctgaaccttcacttcaggaaatagaggaaaatgggtttaaggggcat
agcatgctggctccattcacagctggatggcagagcaccgatttgcatccgcttgttata
gagagatctgagggctcttacgtttatgacatcaatgggaagaagtatatagatgctctt
gcaggactgtggtgtacagctttaggtggtaatgagcctcgattggtcaaagctgcaact
gagcaactaaacaaattaccattctaccattccttttggaaccgtacaaccaaaccctca
ttggatcttgcaaatgaaattctcagcatgttcactgcaagggaaatgggcaaagtattc
ttcacaaatagtggttcagaagcaaatgactctcaggttaaattagtgtggtattataac
aatgcactaggcagggcaaacaagaagaaatttattgctcggtcaaaatcatatcatgga
tcaacgttaatagcagctagtctatcaggtttgcctgcacttcatcagaagtttgatcta
ccagcaccttttgttctgcacacagactgccctcactactggcgcttccgtctttctgat
gagacagaagaagagttttcaactcgacttgccaacaatttggagaatcttatcctaaaa
gaaggacctgaaacaattgctgctttcattgcagaacctgtgatgggtgctggtggtgtg
atccttcctccaaagacctattttgagaagattcaagcagttctcaagaagtatgacatc
ttactaattgcagatgaggtcattactgcattcggaagactagggaccatgtttggatgt
gatatgtataacattaagccagatcttgtctccattgccaaggctctttcttccgcctat
atgccaatcggagcaatccttgttagcccagaaataactgatgtaatttactcacagagc
aataagcttggttctttttctcatggctttacatactcgggacatccagtttcttgtgct
gttgcaatagaaacattgaagatttataaagaaaggaatatcgttgaacatgttaacaaa
attgctccaaggttccaggagggaatcaaagcgttctcaggaagcccaattgttggcgag
atacgtggtcagggactgatacttggaactgaatttgtcgacaacaaatcgccaaatgat
ccattcccagctgaatggggtgtgggttcaatcttcggcgccgagtgtgagaagcgtgga
atgctcattagggtggctggggatagcatcatgctgtcacccccactgataatgactcct
gaagaagttgaagaaatcattatcaaattcggccatgccctgaaggccacagaggaaagg
atcgcagagcttaaatccaagaactag
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