Panicum virgatum (switchgrass): 120679502
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Entry
120679502 CDS
T07260
Name
(RefSeq) protein HOTHEAD-like
KO
K15403
fatty acid omega-hydroxy dehydrogenase [EC:1.1.-.-]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00073
Cutin, suberine and wax biosynthesis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00073 Cutin, suberine and wax biosynthesis
120679502
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Motif
Pfam:
GMC_oxred_C
GMC_oxred_N
NAD_binding_8
DAO
Pyr_redox_2
Lycopene_cycl
FAD_binding_2
Motif
Other DBs
NCBI-GeneID:
120679502
NCBI-ProteinID:
XP_039817042
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Position
6N:complement(34878427..34888002)
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AA seq
591 aa
AA seq
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MDLISRRVVFKALMFLCFIRSSQGRDHFTKLNLPPFLKASRFPTFQHEAYDYIIVGGGTA
GCPLAATLSQKYKVLLLERGGSPYGNRNITLLENFHICLADVSPESPAQGFISTDGVINA
RAKVLGGGTCINAGFYSRAKQSFVQQAGWDADLVNQSYPWVEERIVHWPKVAPWQAALRD
GLLEAGVSPYNGYTYDHLYGTKVGGTIFDETGYRHTAADLLAAGNPNNLRVLLYASVNKI
VFNTKQGHRKPRAIGVQFKDENGRHHQAFLREERGSEIIVSAGAIGSPQLLLLSGIGPRN
ELKKHNISVTLRNEHVGKGMSDNRLALGSSPMNSIFVPMKSPAKQSLIETVGITDAGVFI
EASSGFSQTDDSIHCHHGIMSAEIGQLSTIPPKKRSFNAIQKYVDNKYSLPKEVFDGGFI
LEKIDGPLSTGNLVLVDTDVDSNPSVTFNYFQYPKDLSRCVYGIKTIEKILKTNHFTNLT
ANGAGYPMEMLLNMSVSANINLIPKHTNDTTSLEQFCRDTVTTIWHYHGGCHVGKVVDQQ
YQVIGISALRVVDGSTLFRSPGTNPQATVLMMGRYMGVKILRERLGQAAGV
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggatttgatcagcagaagggtagttttcaaggccctgatgttcctctgcttcatcaga
tcatctcaaggaagagatcatttcaccaaactgaatctccctcccttcctgaaggcaagc
aggttccccacatttcagcatgaggcatatgactacatcattgttggcgggggcactgct
ggatgcccattggcagcgaccctgtcccagaagtacaaggtactcctgctggagagaggt
gggtctccatacggcaaccgcaacatcaccttactggagaacttccacatttgcttggcc
gatgtttcgccagaatcaccagcacaaggttttatctccaccgatggtgtgatcaatgcc
cgtgcaaaggtcctgggtggtggaacctgtataaacgctggcttctacagccgggcaaaa
caaagctttgtgcaacaggcaggttgggacgcagacctggtcaaccagtcctacccttgg
gttgaagagaggattgttcattggcccaaagtcgcaccttggcaagctgctctccgggat
ggactgctggaagcaggggtctcaccatacaatggatatacttatgaccatctctatgga
accaaggttgggggcaccatatttgatgagactgggtaccggcatacagctgctgacctc
cttgctgctggaaatcctaacaaccttagggtgctgctttatgctagcgtcaacaaaata
gttttcaacacgaaacaaggacataggaagccaagggctattggcgttcaattcaaagac
gagaacggcaggcaccaccaagccttcctcagagaagaaaggggtagtgagatcattgtt
tctgccggtgcaattggcagcccacagctattgttgctcagtggaatcggaccaaggaat
gaacttaagaagcacaatatttctgtaaccctccgcaatgaacatgttggtaaaggaatg
tcggacaatcggctcgcgttaggttctagtccaatgaactctatctttgtacctatgaag
agtccagcaaagcaatctctcattgaaactgtcggaataaccgatgctggtgtgtttatt
gaagccagcagtggattcagccagacagatgatagcatccattgccaccatggaatcatg
tctgccgagattggccagctatcaacaattccaccaaagaaaagaagtttcaatgcaatc
caaaagtatgtggataacaaatatagcctaccgaaagaagtatttgacgggggcttcatt
cttgagaagatcgatggcccgctttctactggcaatttagtacttgtggacactgatgtt
gatagcaaccccagtgtcaccttcaattatttccagtatccaaaggatctcagccgatgt
gtctacgggataaaaaccattgagaaaatacttaagacaaaccatttcactaaccttact
gccaatggtgctggatacccaatggagatgctgctcaatatgagcgtatcagctaacata
aacttgataccaaagcacacgaatgacaccacatccttggagcagttttgcagggacaca
gtaacaaccatctggcattaccatggtggatgccatgtgggcaaagtggttgatcaacag
taccaggtgattggcatttcagcactgcgcgtggttgatggatcaaccttatttagatca
ccaggaacgaacccacaagccacagtcctgatgatgggcaggtacatgggggtgaagatt
ctaagggaaagactaggacaagcagcaggagtataa
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