Panicum virgatum (switchgrass): 120680013
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Entry
120680013 CDS
T07260
Name
(RefSeq) adenosylhomocysteinase-like
KO
K01251
adenosylhomocysteinase [EC:
3.13.2.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00270
Cysteine and methionine metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
120680013
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pvir01009
]
120680013
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120680013
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.13 Acting on carbon-sulfur bonds
3.13.2 Thioether and trialkylsulfonium hydrolases
3.13.2.1 adenosylhomocysteinase
120680013
Protein phosphatases and associated proteins [BR:
pvir01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120680013
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120680013
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Gene cluster
GFIT
Motif
Pfam:
AdoHcyase
AdoHcyase_NAD
2-Hacid_dh_C
IlvN
TrkA_N
THF_DHG_CYH_C
NAD_binding_7
F420_oxidored
ELFV_dehydrog
3HCDH_N
DUF5352
XdhC_C
Motif
Other DBs
NCBI-GeneID:
120680013
NCBI-ProteinID:
XP_039817597
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Position
6N:2221902..2224588
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AA seq
485 aa
AA seq
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MALSVEKTSSGREYKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSKPFAGARISGS
LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLEEYWWC
TERCLDWGGAGGPDLIIDDGGDATLLIHEGVKAEEEYEKTGKIPDPDSTDNAEFKIVLTI
IRDGLKADPKKYRKMKERLVGVSEETTTGVKRLYQMQETGALLFPAINVNDSVTKSKFDN
LYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ
ALMEGLQVLTWEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMHGL
ETYPGVKRITIKPQTDRWVFPETNTGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ
LELWKERSSGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLTKSQADYISVPIEGPYKP
AHYRY
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcgctctccgtggagaagacctcgtcgggccgggagtacaaggtcaaggacctgtcc
caggccgacttcggccgcctcgagatcgagctggccgaggtcgagatgcccggcctcatg
gcttgccgcgccgagttcggcccctccaagcccttcgccggcgccaggatctccggctcc
ctccacatgaccatccagaccgccgtcctcatcgagaccctcaccgcgctcggcgccgag
gtccgctggtgctcctgcaacatcttctccacgcaggaccacgccgccgccgccatcgcg
cgggactccgccgccgtcttcgcctggaagggggagacgctcgaggagtactggtggtgc
accgagcgatgcctcgactggggcggggccggcggccccgacctcatcatcgacgacggc
ggcgacgccacgctcctcatccacgagggcgtcaaggccgaggaggagtacgagaagacc
ggcaagatcccggacccggactccaccgacaatgccgagttcaagatcgtgctcaccatc
atccgcgacgggctcaaggccgaccccaagaagtaccgcaagatgaaggagaggctcgtc
ggcgtctcggaggagaccaccaccggggtcaagaggctctaccagatgcaggagaccggc
gcactcctcttccccgccatcaacgtcaatgactccgtcactaagagcaagtttgacaac
ctgtatggttgccgccactccctccctgatggtttgatgagggccaccgatgttatgatt
gccggcaaggttgcagtggtctgcggttatggtgatgttggcaagggctgtgctgctgcc
ctcaagcaggctggtgcccgtgtcatcgtgactgagattgaccccatctgtgcccttcag
gccctgatggagggtcttcaggtccttacctgggaggatgtcgtttctgaagctgacatc
tttgtgactaccactggtaacaaggacatcatcatggttgaccacatgaggaagatgaag
aacaatgcaattgtctgcaacattggtcactttgacaatgagattgacatgcatggtctt
gagacctaccctggtgtcaagcggatcaccatcaagccccagactgatcgctgggtgttc
cctgagaccaacactggcatcattgtccttgctgagggtcgtctgatgaaccttgggtgc
gctactggccaccccagctttgtcatgtcctgctcattcactaaccaggtcattgctcaa
cttgagctgtggaaggagcggagctcaggcaagtatgagaagaaagtgtatgtgctcccc
aagcaccttgatgagaaggttgccgccctccacttgggcaagcttggtgccaagctcacc
aagctcaccaagtctcaggctgactacatcagtgtcccgatcgagggtccctacaagccc
gctcactaccggtactag
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