Panicum virgatum (switchgrass): 120680702
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Entry
120680702 CDS
T07260
Name
(RefSeq) acetyl-CoA carboxylase 2-like isoform X1
KO
K11262
acetyl-CoA carboxylase / biotin carboxylase 1 [EC:
6.4.1.2
6.3.4.14
2.1.3.15
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00061
Fatty acid biosynthesis
pvir00620
Pyruvate metabolism
pvir00640
Propanoate metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01212
Fatty acid metabolism
Module
pvir_M00082
Fatty acid biosynthesis, initiation
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
120680702
00640 Propanoate metabolism
120680702
09103 Lipid metabolism
00061 Fatty acid biosynthesis
120680702
09110 Biosynthesis of other secondary metabolites
00254 Aflatoxin biosynthesis
120680702
Enzymes [BR:
pvir01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.3 Carboxy- and carbamoyltransferases
2.1.3.15 acetyl-CoA carboxytransferase
120680702
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.14 biotin carboxylase
120680702
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.2 acetyl-CoA carboxylase
120680702
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ACC_central
Carboxyl_trans
CPSase_L_D2
Biotin_carb_N
ACCA_BT
Biotin_carb_C
Biotin_lipoyl
ATP-grasp_3
ATP-grasp
Dala_Dala_lig_C
Motif
Other DBs
NCBI-GeneID:
120680702
NCBI-ProteinID:
XP_039818146
LinkDB
All DBs
Position
7N:14290975..14307690
Genome browser
AA seq
2320 aa
AA seq
DB search
MLQLGLAAAASKVLPLLPNHQRSSAGTTFPSASSRPSNRRKNRTRSLRDGGDGVSDAKKH
NQSVRQGLAGIIDLPNEATSEVDISHGSEDPRGPPESYQMNGIINETHNGRHASVSKVVE
FCTALGGKTPIHSILVANNGMAAAKFMRSVRTWANDTFGSEKAIQLIAMATPEDMRINAE
HIRIADQFVEVPGGTNNNNYANVQLIVEIAERVGVSAVWPGWGHASENPELPDALTAKGI
VFLGPPASSMNALGDKVGSALIAQAAGVPTLSWSGSHVEVPLECCLDAIPEEMYRKSCVA
TTEEAVASCQVVGYPAMIKASWGGGGKGIRKVHNDDEVRALFKQVQGEVPGSPIFIMRLA
SQSRHLEVQLLCDQYGNVAALHSRDCSVQRRHQKIIEEGPVTVAPRETVKALEQAARRLA
KAVGYVGAATVEYLYSMETGEYYFLELNPRLQVEHPVTEWIAEVNLPAAQVAVGMGIPLW
QIPEIRRFYGMDYGGGYDIWRKTAALATPFNFDEVDSQWPKGHCVAVRITSEDPDDGFKP
TGGKVKEISFKSKPNVWAYFSVKSGGGIHEFADSQFGHVFAYGLSRSAAITNMALALKEI
QIRGEIHSNVDYTVDLLNASDFRENKIHTGWLDTRIAMRVQAERPPWYISVVGGALFKTV
TANAATVSDYVGYLTKGQIPPKHISLVNSTVNLNIEGSKYTIETVRTGHGSYRLRMNDSA
VEANVQSLCDGGLLMQLDGNSHVIYAEEEAGGTRLQIDGKTCLLQNDHDPSKLLAETPCK
LLRFLVADGAHVDADAPYAEVEVMKMCMPLLSPASGVIHVMMSEGQALQAGDLIARLDLD
DPSAVKRAEPFDGMFPQMGLPVASSSQVHKRYAASLNAAQMVLAGYEHNISEVVQDLVCC
LDDLELPFLQWDELMSVLATRLPRNLKSELEDKYKEYKLNFYRGENKDFPSKLLRDTIEA
NLAYGSEKEKATNERLVEPLVSLLKSYKGGRESHAHFVAKSLFEEYLAVEELFSDGIQSD
VIETLRHQHSKDLQKVVDIVLSHQGVRNKAKLVTALMEKLVYPNPAAYRDLLVRFSSLNH
KRYYKLALKASELLEQTKLSELRASIARSLSDLGMHKGEMTIKDSMEDLVSAPLPVEDAL
ISLFDYSDPTVQQKVFETYISRLYQPLLVKDSIQMKFKESGAFALWEFSGGHVDTKNGQG
AVLDRKRWGAMAVLKSLESARTAIVAALKDSAQHDSSEGNMMHIALLSAENENNISSDNQ
AQQRMEKLTKILNDTSVANDLRAAGLKVISCIVQRDEARMPMRHSFLWSDEKSCYDEEQI
LRHVEPPLSALLELDKLKVKGYNEMKYTPSRDRQWHIYTLRNTDNPKMLHRVFFRTIVRQ
PNAGNKFTSAHIGDTEVGGPTESLSFTSNSILRSLMTAIEELELHAIRTGHSHMYLCILK
EQKLLDLIPFSGSAIVDVGQDDATACSLLKSMALKIHELVGAQMHHLSVCQWEVKLKLDC
DGPASGTWRVVTTNVTSHTCIVDIYREVEDTESQKLVYHSASSSAGPLHGVTLNNPYQPL
SVIDLKRCSARNNRTTYCYDFPLAFETALQKSWQSNGSSVSEGSGNSKSYVKATELVFAE
KHGSWGTPIIPMERPAGLNDIGMVAWILEMSTPEFPNGRQIIVVANDITFRAGSFGPRED
AFFEAVTNLACERKLPLIYLAANSGARIGIADEVKSCFRVGWSDEGSPERGFQYIYLTEE
DYARISSSVIAHKLQMDSGEIRWIIDSVVGKEDGLGVENIHGSAAIASAYSRAYEETFTL
TFVTGRTVGIGAYLARLGIRCIQRLDQPIILTGFSALNKLLGREVYSSHMQLGGPKIMAT
NGVVHLTVSDDLEGVYNILMWLSYVPANIGGPLPITKPLDPPDRPVAYIPENTCDPRAAI
RGIDDSQGKWLGGMFDKDSFVETFEGWAKTVVTGRAKLGGIPVGVIAVETQTMMQLIPAD
PGQLDSHERSVPRAGQVWFPDSATKTAQALLDFNREGLPLFILANWRGFSGGQRDLFEGI
LQAGSTIVENLRTYNQPAFVYIPMAGELRGGAWVVVDSKINPDRIECYAERTAKGNVLEP
QGLIEIKFRSEELQDCMGRLDPELINLKAKLHGAKLGNGSLPDIESLQKSIEARTKQLLP
LYTQIAIRFAELHDTSLRMAAKGVIKKVVDWEESRSFFYKRLRRRISEDVLAKEIRGIAG
DNFTHQSAVELIKEWYFSQATTGCTEWDDDDAFVAWKDNPENYKGYIQKLRAQKVSQSLS
DLADSSSDLEAFSQGLSTLLDKMDPSQRAKLVQEVKKVLG
NT seq
6963 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaacttggattagctgcagctgcctcaaaggtgctgccactactccctaatcac
cagaggagttcagctggaaccacattcccatccgcatcatcgaggccctcaaaccgaagg
aaaaaccgcactcgttcacttcgtgatggaggagatggggtatctgatgccaaaaagcac
aaccagtctgttcgtcaaggtcttgctggcatcattgacctcccaaatgaggcaacatcg
gaagtggacatttcgcatggatctgaggatcccagggggccaccagagtcatatcaaatg
aatgggattataaatgaaacacataacggtagacatgcctcagtgtccaaggttgttgaa
ttttgtacagcgttaggtggcaaaacaccaattcacagtatattagtggccaacaacgga
atggcagcagcaaagttcatgaggagtgttcgtacatgggctaatgatacttttggatca
gagaaggcaattcaactcatagctatggcaactccggaagacatgaggataaatgcagaa
cacattagaattgctgatcaatttgtagaggtgcctggtggaacaaataataacaactat
gcaaatgttcaactcatagtggagatagcagaaagagtaggtgtttctgctgtttggcct
ggttggggacatgcttctgagaatcctgaactgccagatgcattgactgcaaaaggaatc
gtttttcttgggccacctgcatcatcaatgaatgcattgggagataaggttggttcagct
ctcattgctcaagcagccggggtcccgactctttcatggagtggatcgcatgttgaagtt
ccattagagtgctgcttagacgcaatacctgaggagatgtatagaaaatcttgtgttgct
accacagaagaagctgttgcaagttgtcaggtggttggttatcctgccatgatcaaggca
tcctggggaggtggtggtaaaggaataagaaaggttcataatgatgatgaggttagagca
ctgtttaagcaagtacaaggtgaagtccctggctccccaatatttatcatgaggcttgca
tcccagagtcgtcatcttgaagttcagttgctttgtgatcaatatggcaatgtagcagca
cttcacagtcgtgattgcagtgtgcaacggcgacaccaaaagatcattgaggaaggccca
gttactgttgctcctcgtgagactgttaaagcacttgagcaggcagcaaggaggcttgct
aaggctgtgggttatgttggtgctgctactgttgaatacctttacagcatggagactgga
gaatactactttctggagcttaatcccagattacaggtcgagcatccagtcactgagtgg
atagctgaagtaaatctgcctgcagctcaagttgcagttggaatgggcatacctctttgg
cagattccagaaatcagacgtttctatggaatggattatggaggagggtatgacatttgg
aggaaaacagcagctcttgctacaccatttaattttgatgaagtagattctcaatggcca
aagggccattgtgtggcagttagaattactagcgaggatccggatgatggtttcaaacct
actggtggaaaagtgaaggagataagttttaaaagcaagcctaatgtttgggcctacttc
tcagtaaagtctggtggaggcattcatgaatttgctgattctcagtttggacatgttttt
gcatatggactctctagatcagcagcaataacgaacatggctcttgcattaaaagagatt
caaattcgtggagaaattcattcaaatgttgattacacagttgatctcttaaatgcttca
gatttcagagaaaacaagattcatactggttggctcgataccagaatagctatgcgtgtt
caagctgagaggcccccatggtatatttcagtggttggaggagctctatttaaaactgta
accgccaatgcagccactgtttctgattatgttggttatctcaccaagggccagattcca
ccaaagcatatatcccttgtcaactcaacagtaaatctgaatattgaagggagcaaatac
actattgaaactgtaaggactggacatggtagctacagattgcgaatgaatgattcagca
gttgaagcgaatgtacaatctctatgtgatggtggcctcttaatgcagctggatggaaat
agccatgtaatttatgcggaagaagaagctggtggtacacgacttcagattgatggaaag
acatgcttgttacagaatgatcatgatccatcaaagttattagctgagacaccctgcaaa
ctacttcggttcttggttgctgatggtgctcatgttgatgccgatgcaccatatgcggaa
gttgaggttatgaagatgtgcatgcctctcttgtcgcctgcttctggtgtcattcatgtt
atgatgtctgaaggccaggcattgcaggctggtgatcttatagcaaggctggatcttgat
gacccttctgctgtgaaaagagctgaaccatttgatggaatgtttccacaaatgggcctt
cctgttgcttcctctagtcaagtacacaaaagatatgctgcaagtttgaatgctgctcaa
atggtccttgcaggatatgagcataacatcagcgaagttgtacaagatctggtatgctgt
ctggacgatcttgagcttcctttcctacaatgggatgaacttatgtcagttctagcaact
aggcttccaagaaaccttaagagtgagttagaggataaatacaaggaatacaagttgaac
ttttaccgtggggaaaacaaggacttcccatccaagctgctgagagacacaattgaggca
aatcttgcttatggttcagagaaggaaaaagctacgaacgagaggcttgttgagcctctt
gtgagcctactcaagtcgtataagggtgggagagaaagccatgctcattttgttgccaag
tcccttttcgaggagtatcttgctgtggaagaacttttcagtgatgggattcagtctgat
gtgattgaaaccctgcgtcatcagcacagtaaagacctgcagaaggttgtagacattgta
ttgtctcaccagggtgtgaggaacaaagctaagcttgtaacagcacttatggaaaagctg
gtttatccaaatcctgctgcttacagggatctacttgttcgcttctcttcactcaatcat
aaaagatattataagttggcccttaaagcaagcgaacttctcgaacaaactaaactaagt
gaactccgtgcaagcatcgcaagaagcctttctgatctggggatgcataagggagaaatg
actattaaagatagcatggaagatttagtctctgccccattgcctgttgaagatgcactt
atttctttgtttgattacagtgatccaactgttcagcagaaagtgttcgagacatatata
tctcgattgtaccagcctcttcttgtgaaggatagcatccaaatgaaatttaaggaatct
ggtgcctttgctctatgggaattttctggagggcacgttgatactaaaaatggacaaggg
gctgttcttgatcgaaagagatggggtgccatggctgttctcaaatcacttgaatctgca
cgaacagccattgtagctgccttaaaggattcggcacagcatgacagctctgagggcaac
atgatgcacattgctttattgagtgctgaaaatgaaaataatatcagcagtgataatcaa
gctcagcagaggatggaaaaacttaccaagatactcaatgatactagtgtcgcaaatgat
ctccgtgctgctggtttgaaggttataagttgcattgttcagagagatgaagcacgcatg
ccaatgcgccactcattcctctggtcagatgaaaagagttgttatgatgaagagcagatt
ctccggcatgtggaacctcccctctctgcgcttcttgaattggataagttgaaagtgaaa
ggatacaatgaaatgaagtatactccatcacgtgatcgtcaatggcatatttacacactg
agaaatactgataaccccaaaatgttgcatagggtatttttccgaactattgtcaggcaa
cccaatgcaggcaacaagtttacatcagcccatattggcgacactgaagtaggaggtccc
acagaatctttgtcatttacatcaaatagcatcttaaggtcgttgatgactgctattgaa
gaattagagcttcacgcgattaggactggtcattctcacatgtatttgtgcatattgaaa
gaacaaaagcttctcgatctcattcctttctcagggagcgcaattgttgatgttggccaa
gatgatgctactgcttgttcacttttaaaatcaatggctctgaagatacatgaacttgtt
ggtgcacagatgcatcatctttctgtatgccagtgggaggtgaaactcaagttggactgt
gatgggccagccagtggcacctggagagttgtaactacaaatgttactagtcacacgtgc
atcgttgatatctaccgggaagtggaagatacagaatcgcagaagttagtataccattct
gcttcttcgtcagctggtcccttgcatggtgttacgctgaacaatccatatcaacctttg
agtgtcattgatctaaaacgctgctctgctaggaacaacagaactacatattgctatgat
tttccattggcatttgaaactgcactgcagaagtcatggcagtccaatggctccagtgtt
tctgaaggaagcggaaatagtaaatcatacgtgaaggcaaccgagctagtatttgctgaa
aaacatgggtcttggggcactcctataattcccatggagcgtcctgctgggcttaatgac
attggtatggtagcttggatcttagagatgtccactcctgaatttcccaatggcaggcag
attattgttgtagcaaatgatattactttcagagctggatcatttggcccaagggaagat
gcattttttgaagctgtcaccaacctggcctgcgagaggaagcttcctcttatatacttg
gcagcaaactctggtgctaggattggcatagctgatgaagtgaaatcttgcttccgtgtt
ggatggtctgatgaaggcagccctgaacgtggatttcagtacatttatctaactgaagaa
gactatgctcgtattagctcttctgttatagcacataagctgcagatggatagcggtgaa
attaggtggattattgactctgttgtgggcaaggaggatgggcttggtgttgagaatata
catggaagtgctgctattgccagtgcttattctagggcatacgaggagacatttacactt
acattcgtgactggacggactgtagggattggtgcttatcttgctcgtcttggaatacgt
tgcatacagcgccttgaccaacctattattttaactgggttttctgccctgaacaagctt
cttgggcgggaagtgtacagctctcacatgcagttgggtggtcctaagataatggcaacc
aatggtgttgtccacttgactgtttcagatgaccttgaaggtgtttacaatatattgatg
tggctcagctatgtccctgccaacattggtggacctcttcctattacaaaacctttggat
ccaccagacagacctgttgcatacatccctgagaacacatgtgatccgcgtgcagccatt
cgtggtattgatgacagccaagggaaatggttgggtggtatgttcgacaaagacagcttt
gtggagacattcgaaggatgggcaaaaacagttgttactggcagggcaaagcttggagga
attcctgtaggtgtcatagctgtggagacacagaccatgatgcagcttatcccagctgat
ccaggccagcttgattcccatgagcgatctgttccccgtgctggacaagtgtggttccca
gattctgcaaccaagaccgctcaggcattgttggacttcaaccgtgaaggattgcctctg
ttcatccttgctaactggagaggtttctctggtggacaaagagatctgtttgaaggaatt
cttcaggctgggtcaacaattgttgagaaccttaggacatataatcagcctgcatttgtc
tacattcctatggctggagagctacgtggaggagcttgggttgtggttgatagcaaaata
aatccagaccgaattgagtgttatgctgagaggactgcgaaaggcaatgttcttgaacct
caagggttaattgaaatcaagttcaggtcagaggaactccaagattgtatgggtaggctt
gacccagagttgataaatctgaaagcaaaactccatggtgcaaagcttggaaatggaagt
ctaccggacatagagtcccttcagaagagtatagaagctcgtacaaaacagttgttacct
ttatatacgcagattgcaatacggtttgctgaattgcatgatacttccctcagaatggca
gctaaaggtgtgattaagaaagttgtagattgggaagaatcacgttcttttttctacaaa
aggctacggaggaggatctcagaagatgttcttgcaaaagaaataagaggaatagctggt
gacaacttcactcaccaatcagcagttgagctgatcaaagaatggtacttttctcaagcc
acaacaggatgcactgaatgggatgatgatgatgcttttgttgcctggaaggacaatcct
gaaaactataagggatatatccaaaagctgcgggctcagaaagtatctcagtcgctctcc
gatcttgctgactccagttcagatctagaagcattctcccagggtctttctacactatta
gataagatggatccgtcacagagagccaagttggttcaggaagtcaagaaggtccttggt
tga
DBGET
integrated database retrieval system
