Panicum virgatum (switchgrass): 120682458
Help
Entry
120682458 CDS
T07260
Name
(RefSeq) probable UDP-arabinose 4-epimerase 2
KO
K12448
UDP-arabinose 4-epimerase [EC:
5.1.3.5
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
pvir01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
120682458
Enzymes [BR:
pvir01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.5 UDP-arabinose 4-epimerase
120682458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_10
NAD_binding_4
adh_short
Motif
Other DBs
NCBI-GeneID:
120682458
NCBI-ProteinID:
XP_039820316
LinkDB
All DBs
Position
7N:45712074..45716212
Genome browser
AA seq
414 aa
AA seq
DB search
MPTTPRSRSQARTTRPWILPGMDFADSRRKPNFTGKIAVAAALTVMCIIVLKQSPGFSGT
NVFSRHEVGVTHVLVTGGAGYIGSHATLRLLKDNYRVTIVDNLSRGNMGAVRVLQRLFPQ
PGRLQFIYDDLGDAKAVNKLFSENAFDAVMHFAAVAYVGESTMEPLRYYHNITSNTLTVL
EAMAAHNVNTLIYSSTCATYGEPDTMPIVETTPQNPINPYGKAKKMAEDIILDFTKSKKS
NMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGIISGLKIRGTDYPTT
DGTCIRDYIDVTDLVDAHVKALDKAEPGKVGIYNVGTGQGRSVKEFVEACKKATGASIKV
DYLARRPGDYAEVYSDPSKIHRELNWTAQYTDLGQSLTQAWKWQKAHPKGYGSA
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgccaacgaccccgaggagcagaagccaggctaggaccactaggccttggatcttgcca
gggatggacttcgcggattcgagacggaagcctaatttcacggggaagattgctgtggct
gctgccctcacggtcatgtgcataattgtattgaaacagtctcctggtttcagcggtacc
aatgtgttctctcgccatgaagttggggtgacccatgtcttagtgacaggaggggctggg
tatattggctcgcatgctactcttcgtctccttaaggacaactaccgtgttaccattgtg
gataacctttccagaggtaacatgggagctgtaagagttcttcaacggctgtttccacag
cctggaaggcttcaatttatttatgatgatttaggcgatgccaaagctgtgaacaaacta
ttttcagaaaatgcatttgatgctgttatgcactttgctgctgttgcttatgttggggag
agcacaatggagccactgaggtactaccacaacataacatcaaatacactgacagtgctt
gaggcaatggcggcgcataatgtaaatactctgatttactcgagtacttgtgcaacgtat
ggtgaacctgatacgatgcctattgtagaaactactcctcagaatcctatcaatccttat
ggtaaggcaaagaagatggcagaggatatcatcttagatttcacaaaatcaaagaaatca
aacatggctgtcatgatcttaagatacttcaacgtgattggatctgacccagaggggcgg
ctaggagaagctccaaggccagagctgcgtgagcatggtcggatttctggtgcttgtttc
gatgcggctttgggaattatttcagggctaaagattcgaggaaccgattaccccactaca
gatggaacttgcatcagagactacatagatgtcacagatcttgttgatgcccatgtcaaa
gctcttgataaggctgaaccgggcaaagttggaatctacaatgttggcacaggccaaggt
agatcagtgaaggagttcgtagaagcttgcaagaaggcaacaggagcttccatcaaggtt
gactatcttgcccgtagacctggagattatgccgaggtatatagtgacccatcaaaaatc
caccgtgagctcaactggacagctcaatacactgatcttggccaaagccttacccaggcg
tggaaatggcagaaagcccacccaaaaggatatggatcagcctga
DBGET
integrated database retrieval system
