Panicum virgatum (switchgrass): 120682613
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Entry
120682613 CDS
T07260
Name
(RefSeq) glutamate decarboxylase-like
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00250
Alanine, aspartate and glutamate metabolism
pvir00410
beta-Alanine metabolism
pvir00430
Taurine and hypotaurine metabolism
pvir00650
Butanoate metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Module
pvir_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
120682613
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
120682613
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
120682613
00430 Taurine and hypotaurine metabolism
120682613
Enzymes [BR:
pvir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
120682613
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Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Met_gamma_lyase
Motif
Other DBs
NCBI-GeneID:
120682613
NCBI-ProteinID:
XP_039820520
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Position
7N:complement(31821392..31823857)
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AA seq
431 aa
AA seq
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MLDGNPRLNLASFVTTWMEPECDKLIQASINKNYVDMDEYPVTTELQNRCVNMIAHLFNA
PIGDDETAVGVGTVGSSEAIMLAGLAFKRKWQNKMKEAGKPYDKPNIVTGANVQVCWEKF
ARYFEVELKEVKLREGYYVMDPEKAAEMVDENTICVAAILGSTLNGEFEDVKMLNDLLTA
KNAETGWDTPIHVDAASGGFIAPFIYPELEWDFRLPLVKSINVSGHKYGLVYAGVGWVIW
RSKEDLPDELIFHINYLGADQPTFTLNFSKGSSQIIAQYYQLIRLGFEGYKDVMQNCRDN
ATVLREGIQSMGYFDVVSKDSGVPLVAFSLRDTSRYTVFEVAESLRRFGWIVPAYTMPAD
AEHVAVMRVVIREDFSRGLAERLIADLGKTMADMDAHAGKAHKKSAHEIEKEVTTFWRRL
VANKKKSSMVC
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgctggacgggaacccgcggctgaacctggcgtccttcgtcaccacgtggatggaaccc
gagtgcgacaagctcatccaggcctccatcaacaagaactacgtcgacatggacgagtac
cccgtcaccaccgagctccagaaccggtgcgtcaacatgatcgcgcacctcttcaacgcc
ccgatcggcgacgacgagacggcggtcggggtgggcaccgtcggctcctcggaggccatc
atgctggccgggctggcgttcaagaggaagtggcagaacaagatgaaggaggcgggcaag
ccctacgacaagcccaacatcgtcaccggagcaaacgttcaggtgtgctgggagaaattc
gccaggtacttcgaggtggagctcaaggaggtgaagctccgggaagggtactacgtgatg
gaccccgagaaggccgcggagatggtcgacgagaacaccatctgcgtcgccgccatcctc
ggctcgacgctcaacggcgagttcgaggacgtcaagatgctcaacgacctgctcacggcc
aagaacgccgagacagggtgggacacgccgatccacgtggacgcggccagcggcggcttc
atcgcgccgttcatctacccggagctggagtgggacttccggctgccgctggtgaagagc
atcaacgtcagcggccacaagtacggcctcgtctacgccggcgtcggctgggtcatctgg
aggagcaaggaggacctccccgacgagctcatcttccacatcaactacctcggcgccgac
cagcccaccttcacgctcaacttctccaaaggttccagccagattatcgcccagtattac
cagctcatccgtctgggattcgagggttacaaggacgtgatgcagaactgccgcgacaac
gcgacggtgctccgggagggcatccagagcatgggctacttcgacgtggtgtccaaggac
tcgggcgtgccgctggtggccttttccctccgggacacctccaggtacacggtgttcgag
gtggccgagagcctccgccgcttcggctggatcgtgccggcctacaccatgcccgccgac
gccgagcacgtcgccgtgatgcgcgtggtcatccgcgaggacttcagccgcggcctcgcc
gagcggctcatcgccgacctcggcaagacgatggcggacatggacgcgcacgccggcaag
gcgcacaagaagtcggcgcacgagatcgagaaggaggtcaccaccttctggcggaggctc
gtcgccaacaagaagaagagcagcatggtgtgctga
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