Panicum virgatum (switchgrass): 120682920
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Entry
120682920 CDS
T07260
Name
(RefSeq) very-long-chain aldehyde decarbonylase GL1-7-like
KO
K15404
aldehyde decarbonylase [EC:
4.1.99.5
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00073
Cutin, suberine and wax biosynthesis
pvir01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00073 Cutin, suberine and wax biosynthesis
120682920
Enzymes [BR:
pvir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.5 aldehyde oxygenase (deformylating)
120682920
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Gene cluster
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Motif
Pfam:
CER1-like_C
FA_hydroxylase
Motif
Other DBs
NCBI-GeneID:
120682920
NCBI-ProteinID:
XP_039820869
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Position
7N:complement(36676976..36686154)
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AA seq
619 aa
AA seq
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MAARPGPLTEWPWQWMGNFKYLVLAPAVLHTARRVATKGWGDLDPAYVVMLPALLLRMIH
NQIWISLSRYQMARRKNVIVDRSIEFEQVDRESSWDDQIIFNGLEFYLAYAMIPNVRLLP
VWRTDGAIITVLLHMGPVEFLYYWFHRALHHHFLYSRYHSHHHASIVTEPITSVIHPFAE
HVVYFMLFSIPTLTPIFMGCGSVLSVVLYIAYIDFMNNMGHCNFELVPKWIFKAFPPLKY
LMYTPSFHSLHHTQFRTNYSLFMPFYDYMYNTMDKSSDVLYEQSLKVTDETPDLVHLTHM
TTLQSTYHLRIGIASIASKPSDNPVWYSWMIWPVAWLPMVLTWVYGSSAFAIERLQMKKF
KMQTWTIPRYNFQYGMNWERESINSLIERAILDADERGVKVLSLGLLNQAKTLNRSGELF
IQKYPKLRVRLVDGSGLATAVVLKSIPLGTKKVFLSGSTSKVAHATATALCEKGVQVIMN
QKKEYDMLKSRLPERRTVYLKFSNKDIPQIWIGDHIDYKQQQRAPKGTTFVPTSQFPLKK
IRKDCSYLSTPAMKIPEMMENVHTCENWLPRRVMSAWRIAGILHALEGWDMHECGDDMMG
IEKTWSAAIKNGFAPLTKG
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggcagcacggccaggccctttgactgaatggccatggcaatggatgggcaacttcaag
tacctggtcctggcacctgcagtgctgcacactgcccgcagggtggccaccaaggggtgg
ggagaccttgacccagcatatgtcgtcatgctaccagcactgctgctaaggatgatccac
aaccaaatctggatcagcttgtctcgctatcagatggctcgcaggaagaacgtgattgtt
gaccgtagtattgagttcgagcaggtggacagggagagttcctgggatgaccaaatcatc
ttcaacgggctcgagttctatctagcctatgcgatgatccccaatgtcaggctcctcccg
gtctggagaactgatggggccatcatcactgtgcttcttcacatggggcctgtcgagttc
ctctactactggttccatcgggctctgcaccaccatttcctctactctcgctaccattca
caccaccatgcctccatcgtcacagaacccataacctctgtcatccatccatttgctgaa
catgtggtgtatttcatgctgttctcaattccgacattaacacccatttttatgggctgt
ggttctgtcctcagtgttgtcttgtacattgcgtacatcgacttcatgaataatatgggg
cactgcaattttgagctggtaccaaaatggatcttcaaagccttccctcctctgaagtat
ctcatgtacactccatcgtttcactctctccatcacactcagttccgcacaaactactca
ttgttcatgccattctatgactacatgtacaacaccatggacaagtcaagtgacgtgttg
tatgagcaatcgctgaaagtcacagacgaaacaccagatctggttcacctgacacatatg
accaccttgcaatcaacttatcatcttaggattgggattgcgtccattgcctccaaacca
tcagacaaccctgtatggtatagctggatgatatggcctgtggcgtggctgccgatggta
ttgacatgggtttatggatcttcagcttttgccattgagagactccaaatgaagaaattc
aagatgcagacatggacaattccaagatacaacttccaatatggcatgaattgggaaaga
gaatctattaacagcttgatcgaaagggcaatattagatgctgatgaaaggggggttaaa
gtgctcagtctaggactgctaaatcaggcaaagacgcttaatagaagcggtgaactattt
atacaaaaatatccaaaactaagagtgcggcttgttgatggaagtggtttagcaactgca
gtggtgctcaagagcatccctttaggtacaaagaaagtttttctttcaggaagtacttcc
aaggttgcccatgcaacagctaccgccttatgtgagaaaggtgtccaggtaattatgaat
caaaagaaggaatatgacatgctcaagtcacgacttccagagcggagaacagtctaccta
aaattctccaataaagacatacctcagatctggataggagatcacatagattataaacag
caacaaagggcaccaaaaggaacaacgtttgttcctacatcacaatttccgcttaagaag
attcgtaaggattgctcttacttgagtactcctgcaatgaagatcccagagatgatggag
aatgttcacacctgtgagaattggttacccagaagggtcatgagtgcttggcgcattgct
ggaatactgcatgctctagaaggttgggatatgcatgagtgtggtgacgatatgatgggc
atcgagaagacttggtcggcagccattaaaaacggatttgctcctcttacgaaaggttga
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