Panicum virgatum (switchgrass): 120684567
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Entry
120684567 CDS
T07260
Name
(RefSeq) acyl-coenzyme A oxidase 2, peroxisomal-like
KO
K00232
acyl-CoA oxidase [EC:
1.3.3.6
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00071
Fatty acid degradation
pvir00410
beta-Alanine metabolism
pvir00592
alpha-Linolenic acid metabolism
pvir00640
Propanoate metabolism
pvir01040
Biosynthesis of unsaturated fatty acids
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01200
Carbon metabolism
pvir01212
Fatty acid metabolism
pvir04146
Peroxisome
Module
pvir_M00087
beta-Oxidation
pvir_M00113
Jasmonic acid biosynthesis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
120684567
09103 Lipid metabolism
00071 Fatty acid degradation
120684567
00592 alpha-Linolenic acid metabolism
120684567
01040 Biosynthesis of unsaturated fatty acids
120684567
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
120684567
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
120684567
Enzymes [BR:
pvir01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.3 With oxygen as acceptor
1.3.3.6 acyl-CoA oxidase
120684567
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Gene cluster
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Motif
Pfam:
ACOX
Acyl-CoA_dh_M
Acyl-CoA_dh_1
Acyl-CoA_dh_N
Motif
Other DBs
NCBI-GeneID:
120684567
NCBI-ProteinID:
XP_039822356
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All DBs
Position
8N:complement(43563082..43567869)
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AA seq
702 aa
AA seq
DB search
MPPPAGASRSGAGSEEPESPAARRLRRLSLHLLHLEPSPAPADQAAGPALAPAACAGRAR
RVEGGADVAAALAAYLRGRHRAAQLRLFDFLRARPDLQTPVELATAAHRELCFRQLRALV
RDAGVRPLTLMATDPAEYFAVMEAAGGADISLGVKLGVQYSLWGGSVINLGTKKHRDKFF
DGIDNLDYPGCFAMTELHHGSNVQALQTTATFDTVTDEFIINTPNDGAIKWWIGNAAVHG
KFATVFARLILPLQGKGGEPADMGIHAFIVPIRDLETHAVLPGIEINDCGHKIGLNGVDN
GALRFRSVRIPRDNLLNRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGIAYCSVGV
LKVAVTIAVRYALLRHQFGPPKQPEISVLDYQSHQHKLMPMLASSYAFHFATVQLVDKYS
EMKKSNDEDLIADVHVLSSGLKAYITSYTAKSISICREACGGHGYAAVNRFGALRNDHDI
FQTFEGDNTVLLQQVAGDLLKQYQEKFKGGTLSVTWNYLRDSMGTYLSQPNPVTARWEGE
DHLRDPNFQLDAFRYRTSRLLHSVAARLQKHSKTLGGFGAWNRCLNHLLTLAESHIESVI
LANFIESVKSCPDEKTREVLKLVCDLYALDRIWKDIGTYRNVDYVAPNKAKAIHKLTDYL
SYQVRLVAKELVDAFDLPDLIIRAPIGMQSEAYAQYTQYVGF
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgcccgccggcgcgtcccgctccggcgccggctccgaagaacccgagtccccg
gcggcgcgccgcctccgccgcctctccctgcacctcctccacctcgagccctcccccgcc
ccggccgatcaggcggcgggcccggcgctggcccccgcggcgtgcgcggggcgggcgcgg
cgcgtcgagggcggcgcggacgtggcggcggcgctggcggcgtacctgcggggccggcac
cgcgcggcgcagctgcggctgttcgacttcctccgcgcgcgcccggacctgcagacgccc
gtggagctcgccacggccgcgcaccgggagctctgcttccgccagctgcgcgcgctggtg
cgggacgccggggtgcgcccgctcacgctcatggccaccgaccccgccgagtacttcgcc
gtcatggaggccgccggcggcgccgacatctccctcggcgtcaagctgggcgtccagtac
agcctctggggaggttctgtcataaatttaggaaccaaaaagcacagagataagttcttt
gatggaattgacaatttggattacccaggctgttttgcaatgacagaactgcatcatgga
tcgaatgtccaagccctacagactactgctacatttgatactgttactgatgagttcatc
attaacacccccaatgatggggctattaagtggtggattggcaatgctgcagttcatgga
aaatttgctactgtctttgcaaggttaattttgccccttcaaggaaaaggaggagaacct
gctgatatgggcattcacgcattcattgtccccatacgggaccttgaaactcatgctgtt
cttcctggaatcgagatcaatgactgtgggcacaagataggcctgaatggtgtagacaat
ggtgcactgagattccgctcagttaggatacccagagataatcttctgaaccggtttggt
gatgtctcacgagacggaaaatacacaagcagtctccccacaattaacaaaagatttgca
gcaacccttggggagcttgttggtggacgagtcggtattgcatactgttctgttggtgtg
ctcaaagttgcagtaacaattgccgtgaggtatgctcttctgcgccaccaatttggtcca
cctaagcagcccgaaatcagtgtgttggactatcagtctcaccagcacaaactaatgccc
atgttagcatcttcatatgcgtttcactttgccacagtccaattggtggataagtattca
gaaatgaagaaatccaacgatgaggatcttattgctgacgtgcatgttctttcatctgga
ttgaaagcttatataacttcatatacagcgaagtctataagcatatgcagagaagcatgt
ggtggccatggttatgctgctgtaaatcgttttggagcactgcgcaatgaccatgatata
ttccaaacatttgagggggacaacacagttcttctgcagcaggttgctggagatctcttg
aagcaatatcaggagaaatttaagggaggtacactctcagttacctggaattacttgaga
gactccatgggtacctacctatcccagcctaatcctgtcactgcccgatgggaaggggaa
gatcatctgcgggatcctaatttccagctggatgccttcagatatcggacatctcggttg
ctgcatagtgttgctgctcgacttcagaaacacagcaagacgcttggcggttttggcgca
tggaacagatgtttgaatcatctcctcacacttgcagagtcacacattgagtctgtgatc
cttgcaaacttcattgaatcagtaaaaagttgccctgatgaaaaaacacgggaggtccta
aagcttgtgtgtgacctttacgcgctcgataggatctggaaagacattggaacataccgg
aatgtagactatgttgccccaaacaaagcaaaggctattcacaagttgacagactacctt
agctaccaagtgaggctcgtggcaaaagaactcgtcgacgcatttgatcttccagatctc
atcattcgtgccccaattggcatgcaatcagaggcttatgcacagtatactcaatatgtt
ggcttctaa
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