Panicum virgatum (switchgrass): 120685353
Help
Entry
120685353 CDS
T07260
Name
(RefSeq) chalcone synthase C2
KO
K00660
chalcone synthase [EC:
2.3.1.74
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00941
Flavonoid biosynthesis
pvir00960
Tropane, piperidine and pyridine alkaloid biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir04712
Circadian rhythm - plant
Module
pvir_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09110 Biosynthesis of other secondary metabolites
00941 Flavonoid biosynthesis
120685353
00960 Tropane, piperidine and pyridine alkaloid biosynthesis
120685353
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
120685353
09180 Brite Hierarchies
09181 Protein families: metabolism
01008 Polyketide biosynthesis proteins [BR:
pvir01008
]
120685353
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.74 chalcone synthase
120685353
Polyketide biosynthesis proteins [BR:
pvir01008
]
Polyketide synthase (PKS)
Type III PKS
Plant type
120685353
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chal_sti_synt_N
Chal_sti_synt_C
ACP_syn_III
ACP_syn_III_C
FAE1_CUT1_RppA
Motif
Other DBs
NCBI-GeneID:
120685353
NCBI-ProteinID:
XP_039823142
LinkDB
All DBs
Position
8N:complement(37190148..37193322)
Genome browser
AA seq
398 aa
AA seq
DB search
MAGATATVEEVRKAQRASGPATVLAIGTATPANCVYQADYPDYYFRVTKSDHLTDLKEKF
KRMCDKSMIRKRYMHLTEEFLSENPNMCAYMAPSLDARQDIVVVEVPKLGKAAAQKAIKE
WGQPRSRITHLVFCTTSGVDMPGADYQLTKLLGLRPSVNRLMMYQQGCFAGGTVLRVAKD
LAENNRGARVLVVCSEITAVTFRGPSESHLDSLVGQALFGDGAAAVIVGADPDERVERPL
FQLVSASQTLLPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERALEAAFEPLGISDWN
SIFWVAHPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFILDEMRKRSAED
GHATTGEGFDWGVLFGFGPGLTVETVVLHSVPITAAHE
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgcgacggcgacggtggaggaggtgaggaaggcgcagcgcgcgtcggggccg
gccaccgtgctggccatcgggacggcgacgccggccaactgcgtgtaccaggccgactac
ccggactactacttccgggtcaccaagagcgaccacctcaccgacctcaaggagaagttc
aaaaggatgtgcgacaagtcgatgatccggaagcgctacatgcacctgacggaggagttc
ctgagcgagaaccccaacatgtgcgcctacatggcgccgtcgctggacgcgcggcaggac
atcgtggtggtggaggtgcccaagctcggcaaggcggcggcgcagaaggcgatcaaggag
tggggccagccgcggtcccggatcacgcacctcgtcttctgcaccacctccggcgtcgac
atgcccggcgccgactaccagctcaccaagctcctgggcctgcgcccctccgtgaaccgc
ctcatgatgtaccagcagggctgcttcgccggcggcaccgtgctgcgcgtcgccaaggac
ctcgccgagaacaaccgcggcgcgcgggtgctggtggtgtgctccgagatcaccgccgtc
acgttccgcgggccgtccgagtcccacctcgactcgctggtggggcaggcgctgttcggg
gacggcgccgccgcggtgatcgtcggcgccgaccccgacgagcgcgtcgagcggccgctg
ttccagctcgtgtccgcctcgcagaccctgctgccggactcggagggcgccatcgacggc
cacctccgcgaggtcgggctcaccttccacctgctcaaggacgtgccggggctcatctcc
aagaacatcgagcgcgcgctggaggcggccttcgagccgttgggcatctccgactggaac
tccatcttctgggtggcgcaccccggcggcccggccatcctggaccaggtggaggccaag
gtcggcctggacaaggcccggatgcgcgccacccggcacgtgctctccgagtacggcaac
atgtccagcgcctgcgtgctcttcatcctcgacgagatgcgcaagcgctccgccgaggac
ggccacgccaccaccggcgagggcttcgactggggcgtcctcttcggcttcggccccggc
ctcaccgtcgagaccgtcgtcctccacagcgtccccatcaccgccgcgcatgagtga
DBGET
integrated database retrieval system