Panicum virgatum (switchgrass): 120685741
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Entry
120685741 CDS
T07260
Name
(RefSeq) phosphatidate phosphatase PAH2-like isoform X1
KO
K15728
phosphatidate phosphatase LPIN [EC:
3.1.3.4
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00561
Glycerolipid metabolism
pvir00564
Glycerophospholipid metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Module
pvir_M00089
Triacylglycerol biosynthesis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00561 Glycerolipid metabolism
120685741
00564 Glycerophospholipid metabolism
120685741
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pvir01009
]
120685741
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.4 phosphatidate phosphatase
120685741
Protein phosphatases and associated proteins [BR:
pvir01009
]
HAD phosphatases
Other HAD phosphatases
120685741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LNS2
Lipin_N
Lipin_mid
APP1_cat
Motif
Other DBs
NCBI-GeneID:
120685741
NCBI-ProteinID:
XP_039823757
LinkDB
All DBs
Position
8N:44955646..44963754
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AA seq
1419 aa
AA seq
DB search
MYAVGKFGSLISRSVYTVSGPFHPFGGAVDIVVVQQQDGSFKSSPWYVRFGKFQGVLKSR
ENVVNISVNGVEAGFHMYLDGNGEAYFLRNADPNGEEGEFVLSPASSGDELEVPVQEAQL
RKSKSTSCDSSTMEADVGENKILARTTSRRTTILERMFGRKSVKNNAHAVDRVSSLERAE
IAAELLDTKWSTNLPRSSKSHSSDDESSKSKLTEASNSDQMETSKTVLPEHSLDRGKEMD
SNCNSADCNSCSPRGGRNSSAGETDQCLQTTSVKEEVVEIHTHESVDTQGELLHNLEDVA
GREIHTKEAFSNGIFEIQTVETDTTSGKSEVVSQFVTVDSDANQNLADANPPAYATTDVP
TEKHEVTLIPSAPDPVQEKVVILSSSETLEISQDAVQEKMVILSSFETLESSYAVSSISD
DKGHDASDTSLAHSVEREEDSRVSDGSREQLFSEERSFASCGAPSNKKDMIKVVVEEHEA
FILEDSAPQILQHNGPDMDISVDSVSLSNTDAAHDLACQHDVVYPDASSSVIETSSYVPD
NDPEDVTNNLTVENKACSIELDVSVTQIPTIGDGSTECNAQSANFPKTIVESSPTATGSS
SLVNDHENVTKNLIVENKACNREPDVSVTLTSTIGDGATECTAQSANFPNKMEIEGSPTV
PGSSSLGNDPEDVTQNLIVENKACNREPDVFVTLTSTIGDGPTECTAQSANFPKEIEIEG
SPTVAGSSSLVNDPKDVTENLIVENEACNREPDVFVTLTSTIGDGPTECITQSATFPNKI
DVEDAPTATGSSSLVDVEVQNTKTEDETGRSSSVSGGEVGFVLEATAEPEEEAEAAVSFS
EYTEEIQFQFSDNDEYFADRKAMDDIVADKTAGKGGHDKSDCDTEKQEGGGVDLANELEN
CSDSLRPVTSPIFIPTSDLQSGDNSIEAKSLPNLRSHIHDLERPDSFQLSRSLQSNAENN
GVDPVKSMNSSFLEQKPEVTGDSEENLSPPEVTSNVVPDDKHADNLKVDSFTPFVELSLC
RHLLSEGMGEDAARSAFDSEMVTLEKFRTMKQSLVRNNRLVVRIAGRYFPWDAAAPIVLG
LISFSEEQVFEPKGMIKVERVEPTAEPGGSWRIWPFSFRRTRTISAVQPVSESTVETSAS
APAKESTPVNELDRERNKSRAKRIERKVRSLTPTSEELASLDLREGKNVVTFTFSTAIVG
KQQVDCHIYLWKWNTRIVISDVDGTITKSDVLGQFMPLVGVDWSQNGVAHFFSAIKENGY
QLLFLSARAISQAHITRRFLFSLKQDGKALPDGPVVISPDGLFPSLYREVIRRAPHEFKI
SCLEAIKDLFPPDSNPFYAGFGNRDTDELSYLKVGIPMGKIFIINPKGEVAVNRRVDTKS
YTSLHALVHGMFPPISSSSEQEDYNTWNYWKMPLLDVDM
NT seq
4260 nt
NT seq
+upstream
nt +downstream
nt
atgtacgccgtggggaagttcggcagcctcatctctcgcagcgtgtacaccgtctccggc
ccgttccacccgttcggcggcgcggtcgacattgttgtcgtgcagcagcaggacggcagc
ttcaagagctcgccgtggtacgtccggttcggcaagttccagggggttctcaagtcaagg
gagaatgtcgtcaacatctctgtcaatggcgtcgaagctgggttccacatgtacctggat
ggcaatggcgaggcttacttccttaggaatgcagacccgaatggtgaggaaggtgaattt
gttctctcccccgcatcatcaggtgatgagctggaggtaccggtccaggaagctcagttg
aggaagtcgaagagcacttcatgtgatagctccacgatggaggctgatgttggggagaac
aagatactcgcgaggacaacctcaaggcggaccaccatacttgaacgaatgtttggtcgg
aagtcagttaagaacaatgcacatgctgtggatagagtgagctcattagagcgagcagag
attgctgccgaactccttgatacaaagtggtcgacaaatctcccgcggagttcgaaatct
catagttctgatgatgaatcttccaagagcaagttgacagaagctagcaacagtgatcag
atggaaacctcaaagactgtactgccagaacatagcttggatcgtgggaaagagatggac
tctaactgcaatagtgctgactgcaattcttgtagtcctcgtggaggaagaaatagttcg
gcaggtgaaactgatcagtgtttacaaacaactagtgtgaaggaagaggttgttgagata
catacacatgagtctgtcgatactcaaggtgagttgctgcataatttggaagatgttgca
ggaagggaaatacatacaaaggaggccttttccaatggcatttttgaaatccagaccgtt
gagacagacactacaagcggtaagagcgaggtagtttctcagtttgtcactgtagattca
gatgccaaccaaaatttggcagatgccaatccaccagcttatgcaaccacagatgtacca
actgaaaagcatgaggttacgttgatcccttctgcacctgatccagttcaagagaaagtt
gtcattctcagcagttctgagactctggagatttcacaagatgcagttcaagagaaaatg
gtcattctcagcagttttgagactctggagagctcatatgctgtgtccagtatttcagat
gacaaaggtcatgatgcatcagatacctcactggctcacagtgtagaacgcgaggaggat
tccagagtctctgatgggagtagagagcagctattttctgaggaaaggtcatttgcaagc
tgcggtgctcccagcaacaaaaaagacatgattaaagtggttgttgaagaacatgaagct
tttatcttagaagattcagctccccaaatcttgcaacataatggtccagatatggatatt
tctgtggacagtgtttcactttcaaatactgatgcagctcatgatttagcttgtcagcat
gatgtggtttatcctgatgcttcttctagtgttatagagacatcaagttatgtgcctgac
aacgatcctgaagatgttacaaataacttaactgtggaaaataaagcatgcagcatagag
cttgatgtttctgttactcagatcccaacaataggagatggatccacagaatgcaatgcc
cagtcagctaattttcccaagacaatagtagagagctcaccaactgctactgggtcttcc
agtttggtcaatgatcatgaaaatgtaacaaagaacttaattgtggaaaataaagcatgc
aacagagagcctgatgtttctgttactctgacctcaacaataggagatggagccacagaa
tgcactgctcagtcagctaatttccctaataaaatggaaatagagggttcaccaactgtt
cctgggtcttccagtttgggcaatgatcctgaagatgtaacacagaacttaattgtggaa
aataaagcatgcaacagagagcctgatgtttttgttactctgacctcaacaataggagat
ggacccacagaatgcactgctcagtcagctaattttcctaaggaaatagaaatagagggt
tcaccaactgttgctgggtcttccagtttggtcaatgatcctaaagatgtaacagagaac
ttaattgtggaaaatgaagcatgcaacagagagcctgatgtttttgtcactctgacctca
acaataggagatggacccacagaatgcattactcagtcagctacttttcctaataaaata
gatgtagaggatgcacctactgctaccgggtcttccagcttggtcgatgttgaagtgcaa
aacacaaaaacagaagatgaaaccggaagatctagttctgtgagtggaggtgaagttggg
tttgtgcttgaggctacagctgagcctgaggaagaagcagaagcagcagtatcattctct
gagtatacagaagaaattcagtttcaatttagtgataatgatgaatattttgcggataga
aaggccatggatgacatagtggctgataaaacagcaggcaaaggaggacatgacaaatct
gattgtgacacagaaaaacaggaaggaggtggtgtagatcttgcaaatgaattggaaaac
tgctctgattcattaaggcctgtgactagccctatttttattcctacaagtgacctgcag
tcaggagataacagcatagaggctaagtctctaccaaatcttcgttctcacatacatgat
cttgaaaggcctgatagttttcagctaagccgctcactacaatcaaatgctgaaaataat
ggggttgacccagtcaagagtatgaattcttcttttcttgagcagaaaccagaagttact
ggtgattcagaagaaaatttgagcccacctgaggttaccagcaatgttgtacctgatgac
aagcacgctgacaacctgaaagttgattcattcaccccttttgtggaattatcactatgc
aggcacctgttatctgaaggcatgggggaggatgctgctcgcagtgcatttgattctgag
atggtaaccttagagaagttccgtaccatgaagcagtcactggtgagaaacaataggtta
gttgttaggattgctggccgctattttccctgggatgcagctgcgcctatagtgctcggt
ttgatctctttcagtgaggaacaagtttttgaacccaaaggcatgataaaggtggagcga
gttgagccaactgcagaaccaggtggtagctggagaatctggccatttagtttcagacgg
acaaggactattagtgctgtccagccagttagtgaaagcactgttgagacttctgcatcc
gctcctgctaaagaatcgacacctgttaacgaattagatagagaaaggaataaatccagg
gcaaagaggattgagaggaaggtgcgatcactcactccaacatctgaggagctcgcatct
cttgatcttagagagggcaagaatgtggtaacatttaccttctcaactgcaattgttggg
aaacagcaggttgattgtcacatatatttatggaaatggaatacgcgcattgtcatatca
gatgtggatggcactatcaccaagtctgacgttcttggccagttcatgccattggttggt
gttgattggtctcaaaatggagttgctcattttttttctgcaataaaggaaaatggatat
cagcttctatttctgagtgcacgcgctatttcacaagcccacattacgagacggtttctt
ttcagcttaaagcaggatggcaaagcacttcctgatggccctgttgttatatcccctgat
ggtctcttcccttcactttacagagaagttatcagaagagctcctcatgaattcaagatt
tcatgcctagaggctatcaaagatctatttcctcctgactcgaatccattttatgctgga
ttcggaaatagagatacagatgagcttagttacctcaaagttggtattcctatgggcaag
atcttcataataaaccccaagggtgaagttgcagtaaatcggcgagttgatacaaagtca
tacacatccctgcatgctcttgtccatggaatgttcccaccaatatcatcatcttcggag
caggaggactacaatacctggaattactggaaaatgccattgcttgatgttgatatgtga
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