Panicum virgatum (switchgrass): 120687321
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Entry
120687321 CDS
T07260
Name
(RefSeq) alanine aminotransferase 2-like
KO
K00814
alanine transaminase [EC:
2.6.1.2
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00220
Arginine biosynthesis
pvir00250
Alanine, aspartate and glutamate metabolism
pvir00710
Carbon fixation in photosynthetic organisms
pvir01100
Metabolic pathways
pvir01200
Carbon metabolism
pvir01210
2-Oxocarboxylic acid metabolism
pvir01230
Biosynthesis of amino acids
Module
pvir_M00171
C4-dicarboxylic acid cycle, NAD - malic enzyme type
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09102 Energy metabolism
00710 Carbon fixation in photosynthetic organisms
120687321
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
120687321
00220 Arginine biosynthesis
120687321
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pvir01007
]
120687321
Enzymes [BR:
pvir01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.2 alanine transaminase
120687321
Amino acid related enzymes [BR:
pvir01007
]
Aminotransferase (transaminase)
Class I
120687321
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Motif
Other DBs
NCBI-GeneID:
120687321
NCBI-ProteinID:
XP_039825232
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All DBs
Position
9N:complement(33221207..33226290)
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AA seq
482 aa
AA seq
DB search
MAPSVAVENLNPKVLKCEYAVRGEIVIHAQRLQQQLQTQPGSLPFDEILYCNIGNPQSLG
QQPVTFFREVLALCDHPSLLEKEETKSLFSADAISRAKRILSTIPGRATGAYSHSQGIKG
LRDAIAAGIALRDGFPANADDIFVTDGASPGVHMMMQLLLRDEKDGILCPIPQYPLYSAS
IALHGGTLIPYYLDEKTGWGLEISELKKQLEDARSKGIDVRALVVINPGNPTGQVLAEDN
QCDIVRFCKNEGLVLLADEVYQENIYVDDKKFNSFKKIARSIGYGEDDLPLVSFQSVSKG
YYGECGKRGGYMEITGFSASVREQVYKIASVNLCSNITGQILASLIMNPPKEGDESYAAY
KAEKDGILQSLARRAKALEDAFNNLEGISCNKAEGAMYLFPQIHLPQKAIEAAKAAKKAP
DAFYALRLLEATGIVVVPGSGFGQVPGTWHIRCTILPQEDKIPAVITRFKAFHEAFMAEY
RD
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggcccccagcgtcgccgtggagaacctcaaccccaaggtcttaaaatgtgaatatgca
gtacgtggggagattgtcattcatgctcagcgcttgcagcaacagctacaaactcaacca
gggtctcttccttttgatgagatcctctactgcaacattgggaatcctcaatctcttggt
cagcaaccagtgacattcttcagggaggttcttgctctttgtgatcatccatccttgttg
gaaaaagaggagactaagtcattgttcagtgctgatgctatttctcgagcaaagcggatt
ctttctactattccaggaagagcaacaggtgcatacagtcacagccagggtatcaaagga
cttcgtgatgcaattgctgctgggattgcgttacgtgatggattccctgcaaatgcagat
gacattttcgtaactgacggcgcaagtcctggggtgcacatgatgatgcaattactgtta
agggatgagaaagatggcattctgtgcccaattcctcagtaccctctgtactcagcctcc
atagctcttcatggtggaactcttatcccctattaccttgatgaaaaaaccgggtggggt
ttggagatctctgaacttaagaagcaactcgaagatgctcggtcaaaaggcattgacgtt
agggccttggtggttatcaatcctggaaatccaactgggcaggttcttgctgaggacaac
caatgtgacatagtgagattctgcaaaaatgagggccttgttcttctagctgatgaggta
tatcaagagaacatctatgttgatgacaagaaatttaactctttcaagaagatagcaaga
tccattggatatggcgaggatgatctccctctagtatcatttcagtctgtttctaaagga
tattatggtgagtgtggtaaaagaggaggctacatggagattactggcttcagtgcttcc
gtaagagagcaggtctacaagatagcttcggtgaacttatgctccaatatcactggtcaa
atccttgccagccttatcatgaatccaccaaaggaaggggatgaatcatatgctgcctac
aaggcagagaaagatggaatccttcaatctctagctcgtcgtgcaaaggcattggaggat
gcattcaacaatcttgagggaatttcgtgtaacaaggctgaaggagcaatgtaccttttc
cctcagattcatctgccacagaaggcaattgaggctgctaaagcagctaagaaagcacct
gatgcattctatgcgcttcgtctccttgaagcaactggaattgttgtggtccctggatcc
gggtttggccaagttcccggaacatggcatatcaggtgcacgatcctgccgcaggaagac
aagatccccgccgtgatcacccgcttcaaggcgttccatgaggcgttcatggccgagtac
cgcgactaa
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