Panicum virgatum (switchgrass): 120688171
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Entry
120688171 CDS
T07260
Name
(RefSeq) asparagine--tRNA ligase, chloroplastic/mitochondrial-like
KO
K01893
asparaginyl-tRNA synthetase [EC:
6.1.1.22
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120688171
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pvir01007
]
120688171
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvir03016
]
120688171
Enzymes [BR:
pvir01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.22 asparagine---tRNA ligase
120688171
Amino acid related enzymes [BR:
pvir01007
]
Aminoacyl-tRNA synthetase
Class II (A)
120688171
Transfer RNA biogenesis [BR:
pvir03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
120688171
Prokaryotic type
120688171
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
DUF5576
Motif
Other DBs
NCBI-GeneID:
120688171
NCBI-ProteinID:
XP_039826281
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Position
2K:56528160..56533836
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AA seq
553 aa
AA seq
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MAAAAAARLLRLAPRRLQVKTSPLAALSFPLPRTPPLAAASGRRQSFCAAAQASAHAPAA
AAAAATGPAGEAVGEFRKRLRVADVKGGEDEGAAWVGKELAVRGWVRTCRAQRTVTFVEV
NDGSCLSNMQCVLTPDTEGYDQIDSVTTGASVLVEGVVASSQGGKQKVELKVSKITVIGK
SDPTSFPIQKKRASREFLRTVAHLRPRTNTFGAVTRVRNALAYATHKFFQDNGFVWVSSP
IITASDCEGAGEQFYVTTLLSNSAEGGSLLKDIPATKDGRVDWSQDFFCKPAFLTVSGQL
NGETYASALSDIYTFGPTFRAENSNTARHLAEFWMIEPELAFADLNDDMACATAYLQYVV
KYILENCKEDMDFFNTWVEKGIIDRLNDVVEKKFVHLSYTDAVELLLGSKKKFEFPVEWG
LDLQSEHERYITEVAFGGRPVIIRDYPKEIKAFYMRQNDDGKTVAAMDLLVPRVGELIGG
SQREERLDHLEARLDEQNLNKESYWWYLDLRRYGSVPHAGFGLGFERLVQFATGIDNIRD
AIPFPRVPGSAEF
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgccgcggccgcccggctcctccgcctggccccgcgcaggctccaggttaag
acctccccgctcgccgcactctcgttcccgctcccgcgtacgccgccgctcgccgccgcc
tcggggcggcggcagagcttctgcgccgcggcgcaggcctccgctcacgcccccgctgcc
gctgcggccgcggcgaccgggccggcgggggaggccgtgggagagttcaggaagcggctg
cgggtggcggatgtgaagggaggggaggacgagggcgccgcgtgggtgggcaaggagctc
gccgtgcgcgggtgggtgcgcacctgccgcgcccagaggaccgtcaccttcgttgaggtc
aatgatggctcttgcttgtccaatatgcaatgtgtattgactcctgatacagaaggctat
gaccagatagactctgtgactaccggagcatctgtactagttgagggagttgttgcaagc
agccaaggcggtaagcaaaaagtggagttgaaggtttcaaagatcactgtgattgggaaa
agtgaccccacatcttttcctatacagaagaaacgggcatcaagagaatttcttagaact
gtagcccatctccgtcctcggacaaacacttttggtgcagtgacaagagtgagaaacgct
ctggcatatgcaactcataaattcttccaagacaatggatttgtttgggtatcgagccct
attattactgcctcggattgtgaaggagctggggagcagttttatgtgactactttgctt
tcaaacagcgctgaaggtggttccttactcaaagatattcctgctaccaaggatggaagg
gttgattggtcacaggatttcttctgcaaaccagcatttctgacagtgtctggacagctt
aatggcgaaacatatgcttcggctctgtctgatatttacacatttggtccaacatttagg
gctgaaaattcaaacacggcaagacatctggctgagttttggatgattgaacctgagctt
gcctttgcggatctgaatgatgacatggcttgtgcaactgcatatctccagtatgtagta
aagtatattctagagaactgcaaagaagatatggatttcttcaatacatgggttgagaaa
ggcataatagatcgattaaatgatgtagtagagaagaaattcgttcacttgtcatacact
gatgctgttgagctacttcttgggtccaagaagaaatttgagttcccggtggaatggggg
ttagatcttcaaagtgagcatgagagatacatcacagaagttgcttttggtggccgccca
gttataattagagattacccaaaggaaatcaaggctttctatatgcggcaaaatgatgat
gggaagacagttgctgcaatggatttgttggttcctcgggttggtgaacttattggtgga
agccagagggaagagcgccttgatcacctcgaagcccggttggatgagcaaaatctgaac
aaggagagctactggtggtatttggatctacggcgatatggatcagttccccatgctggt
tttggtcttggatttgaacggcttgtacagtttgcaactggaattgacaacatcagagat
gccatcccgtttccccgagttcctggctctgctgagttttag
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