Panicum virgatum (switchgrass): 120689027
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Entry
120689027 CDS
T07260
Name
(RefSeq) malate dehydrogenase, cytoplasmic
KO
K00025
malate dehydrogenase [EC:
1.1.1.37
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00020
Citrate cycle (TCA cycle)
pvir00270
Cysteine and methionine metabolism
pvir00620
Pyruvate metabolism
pvir00630
Glyoxylate and dicarboxylate metabolism
pvir00710
Carbon fixation in photosynthetic organisms
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01200
Carbon metabolism
Module
pvir_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pvir_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pvir_M00012
Glyoxylate cycle
pvir_M00168
CAM (Crassulacean acid metabolism), dark
pvir_M00171
C4-dicarboxylic acid cycle, NAD - malic enzyme type
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
120689027
00620 Pyruvate metabolism
120689027
00630 Glyoxylate and dicarboxylate metabolism
120689027
09102 Energy metabolism
00710 Carbon fixation in photosynthetic organisms
120689027
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
120689027
Enzymes [BR:
pvir01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
120689027
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Motif
Pfam:
Ldh_1_C
Ldh_1_N
3Beta_HSD
Motif
Other DBs
NCBI-GeneID:
120689027
NCBI-ProteinID:
XP_039827308
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Position
9N:complement(23589466..23593632)
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AA seq
332 aa
AA seq
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MAKEPMRVLVTGAAGQIGYALVPMIARGVMLGADQPVILHMLDIPPAAEALNGVKMELVD
AAFPLLKGVVATTDVVEACTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEAH
AAPNCKVLVVANPANTNALILKEFAPSIPERNVTCLTRLDHNRALGQISERLNVQVSDVK
NVIIWGNHSSTQYPDVNHATVKSSSGEKPVRELIADDAWLNGEFITTVQQRGAAIIKARK
LSSALSAASSACDHIRDWVLGTPEGTFVSMGVYSDGSYGVPAGLIYSFPVTCSGGEWKIV
QGLPIDEFSRKKMDATAQELSEEKALAYSCLE
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaggaaccgatgcgcgtgctcgtcaccggcgccgcaggacaaatcggatatgcg
ctcgttcccatgattgctagaggagttatgcttggtgctgaccaacctgttattctgcac
atgctcgacattccgccagcggctgaagctcttaatggtgttaagatggagttggttgat
gctgcatttcctcttcttaagggagttgttgcaacaactgatgttgtggaggcctgcact
ggtgtgaatgttgcggtcatggttggtggattccctaggaaggagggaatggaaaggaag
gatgttatgtcaaaaaatgtttcaatctacaaagctcaagcatctgcccttgaagcccat
gctgcccccaactgcaaggttctggttgttgccaacccagcaaataccaatgctcttatc
ttgaaagaattcgctccatctatccctgagaggaatgttacttgcttgacccgcctggat
cacaacagggctcttggccagatttctgagagacttaatgtccaagtcagtgatgtgaaa
aatgttattatttggggtaaccactcgtccactcagtaccctgatgttaaccatgccaca
gtgaagtcttccagtggagagaaacctgttcgtgaacttattgctgatgatgcatggctt
aatggggaattcatcacaaccgtccagcagcgtggtgctgcaatcatcaaggccaggaag
ctctccagtgccctttctgctgccagctctgcttgtgaccacattcgtgattgggttctt
ggaacccctgagggaacatttgtttccatgggtgtgtactccgatggttcgtacggtgtg
cctgctggactgatctactcattcccagtaacatgcagcggtggtgaatggaaaatcgtt
caaggccttcccatcgacgagttctcgaggaagaagatggacgccaccgcccaggagctg
tctgaggagaaggcgcttgcttactcatgcctcgagtaa
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