Panicum virgatum (switchgrass): 120690206
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Entry
120690206 CDS
T07260
Name
(RefSeq) phosphoenolpyruvate carboxykinase (ATP)-like
KO
K01610
phosphoenolpyruvate carboxykinase (ATP) [EC:
4.1.1.49
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00010
Glycolysis / Gluconeogenesis
pvir00020
Citrate cycle (TCA cycle)
pvir00620
Pyruvate metabolism
pvir00710
Carbon fixation in photosynthetic organisms
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01200
Carbon metabolism
Module
pvir_M00003
Gluconeogenesis, oxaloacetate => fructose-6P
pvir_M00170
C4-dicarboxylic acid cycle, phosphoenolpyruvate carboxykinase type
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
120690206
00020 Citrate cycle (TCA cycle)
120690206
00620 Pyruvate metabolism
120690206
09102 Energy metabolism
00710 Carbon fixation in photosynthetic organisms
120690206
Enzymes [BR:
pvir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.49 phosphoenolpyruvate carboxykinase (ATP)
120690206
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Gene cluster
GFIT
Motif
Pfam:
PEPCK_ATP
AAA_24
Motif
Other DBs
NCBI-GeneID:
120690206
NCBI-ProteinID:
XP_039828711
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Position
9N:70947305..70952768
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AA seq
660 aa
AA seq
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MAAPNGLARIETHGRTKQHVNGVCHDDSAAPVRAQTIDELHSLQRKWSAPTTPIKDGAAS
PFAAALSEEERHRQQLQSISASLASLTRETGPKVVKGDPARKGEAAAKGAPQTPQKHHQH
HHPAAPTIAVSDSSLKFTHVLYNLSPAELYEQAIKYEKGSFITSTGALATLSGAKTGRSP
RDKRVVKDEAAAQELWWGKGSPNIEMDEHTFLTNRERAVDYLNSLDKVFVNDQFLNWDPE
NRIKVRIISARAYHSLFMHNMCIRPTDEEMESFGTPDFTIYNAGQFPCNRYTHYMTSSTS
VDINLARREMVILGTQYAGEMKKGLFGVMHYLMPKRGILSLHSGCNMGKDGDVALFFGLS
GTGKTTLSTDHNRLLIGDDEHCWSDNGVSNIEGGCYAKCIDLSQEKEPDIWNAIKFGTVL
ENVVFDEHTREVDYTDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPP
VSKLNLAQTMYHFISGYTALVAGTEDGIKEPQATFSACFGAAFIMLHPTKYAAMLAEKMQ
KYGATGWLVNTGWSGGRYGVGKRIRLPYTRKIIDAIHSGELLTANYKKTEVFGLEIPTAI
DGVPSEILDPISTWTDKAAYKETLLRLAGLFKKNFEVFASYKIGDDSSLTDEILAAGPSF
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccgaacgggctcgcgcggatcgagacgcacgggaggacgaagcagcacgtg
aacggcgtgtgccacgacgacagcgcggcgccggtgcgcgcgcagaccatcgacgagctg
cactcgctgcagcggaagtggtcggcgcccaccacgcccatcaaggacggcgccgcctcg
cccttcgctgccgcgctctccgaggaggagcgccaccgccagcagctgcagtccatcagc
gcgtcgttggcgtccctgacacgtgaaaccgggcccaaagtcgtcaagggcgacccggcc
aggaagggcgaggccgccgccaagggcgcgccgcagacgccgcagaagcaccaccagcac
caccaccccgccgcccccaccatcgccgtcagcgacagctccctcaagttcacccatgtc
ctctacaacctctccccagccgagctgtacgagcaggcgatcaagtacgagaagggctcg
ttcatcacgtccaccggcgcgctggccacgctgtccggcgccaagaccggccgctcgccc
agggacaagcgcgtcgtcaaggacgaggccgccgcgcaggagctctggtggggcaagggc
tcgcccaacatcgagatggacgagcacacgttcctgaccaaccgggagcgggccgtggac
tacctcaactccctggacaaggtgttcgtgaacgaccagttcctcaactgggaccccgag
aaccgcatcaaggtccgcatcatctccgccagggcgtaccactccctcttcatgcacaac
atgtgcatccggcccacggacgaggagatggagagcttcggcacgccggacttcaccatc
tacaacgccgggcagttcccctgtaaccgttacacgcactacatgacgtcgtcgacgagc
gtagacatcaacctcgctaggagggagatggtgatcctgggcacgcagtacgccggggag
atgaagaaggggctcttcggcgtcatgcactacctcatgcccaagcgcggcatcctctcg
ctgcactccggctgcaacatgggaaaggacggtgacgtcgccctcttctttgggctctca
ggtaccgggaagacgacgctgtcgacggatcacaacaggcttctgatcggtgacgatgag
cactgctggagcgacaatggcgtctccaacatcgagggcggttgctacgccaagtgcata
gacctgtcccaggagaaagagcctgatatttggaacgcaatcaagtttggaactgtgctg
gagaacgtcgtcttcgatgagcatactcgtgaagtcgactacaccgacaagtctgtcacc
gagaacacccgggctgcctacccgatcgagtacatccccaacgccaagatcccgtgcgtc
gggccgcaccccaagaacgtcatcctcctggcgtgcgacgcgttcggggtgctcccgccg
gtcagcaagctgaacctggcgcagaccatgtaccacttcatcagcggctacaccgccctg
gtcgccggcacggaggacggcatcaaagagccgcaggccacgttctcggcctgcttcggc
gcggcgttcatcatgctccacccgaccaagtacgccgccatgctcgccgagaagatgcag
aagtatggcgccaccgggtggcttgtcaacaccggctggtccggcggcaggtacggtgtg
ggcaagaggatcaggctgccctacacccggaagatcatcgacgccatccactccggcgag
ctcctcaccgccaactacaagaagacggaggtctttgggctggagatccccaccgcgatc
gacggcgtgccgtcggaaatcctcgacccgatcagcacctggacggacaaggccgcgtac
aaggagacgctcctgaggctcgccggcctcttcaagaagaacttcgaggtgttcgccagc
tacaagatcggggacgacagcagcctgaccgacgagatcctcgccgcaggccccagcttc
tga
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