Panicum virgatum (switchgrass): 120690773
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Entry
120690773 CDS
T07260
Name
(RefSeq) very-long-chain aldehyde decarbonylase GL1-5
KO
K15404
aldehyde decarbonylase [EC:
4.1.99.5
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00073
Cutin, suberine and wax biosynthesis
pvir01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00073 Cutin, suberine and wax biosynthesis
120690773
Enzymes [BR:
pvir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.5 aldehyde oxygenase (deformylating)
120690773
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Motif
Pfam:
CER1-like_C
FA_hydroxylase
Motif
Other DBs
NCBI-GeneID:
120690773
NCBI-ProteinID:
XP_039829511
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Position
9N:24361364..24366048
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AA seq
620 aa
AA seq
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MATNPGPFTEWPWKKLGNFKYLLLAPWVAHGGYLAATKGWRAADPGYLAILPSLLLRALH
NQAWITASRVQNARSRRQVVADRGIEFEQVDRERNWDDQIILSGILLYLGALYLPGGQRP
PLWRADGFLLIALLHAGPVEFLYYWFHRALHHHFLYTRYHSHHHSSIVTEPITSVIHPFA
ELVAYEVLFAIPLITCALTGTASIVAFEIYVLYIDFMNNMGHCNFELVPSWLFKWFPPLK
YLMYTPSFHSLHHTQFRTNYSLFMPFYDYIYNTMDKSSDTLYEKSLKAKDETVDVVHLTH
LTSLQSIYHMRPGFAEYASKPYTSKWYMRMMWPVSWLSMVLTWTYGTSFAVERNLMKKLR
MQSWAIPRYSFHYGLSWEKEAINNLIEKAICEADKKGAKVVSLGLLNQAHNLNGNGELYL
QKYPKLEVRLVDGTSLAAAVVVNSIPQGTDQVVLAGNISKVAHAIAAALCKKNVKVVMTN
KQDYHFLKPNMPEDAAENLLFSKTPTAKVWLIGEGLDASEQFKAQKGTQFIPYSQFPPKM
VRKDSCTYSTTPAMSVPKTLQNVHSCENWLPRRVMSAWRIAGMVHALEGWNEHECGNSVL
DMEKVWSAALLHGFCPIAQV
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaaccccggccccttcaccgagtggccatggaagaagctcggcaacttcaag
tacttgctgctggcgccgtgggtagcgcacggcgggtacctggcggcgaccaaggggtgg
cgcgcggcggacccggggtacctggccatcctgccgtcgctgctcctccgggcgctccac
aaccaggcgtggatcacggcgtcccgcgtgcagaacgcgcggagccggcggcaggtggtg
gccgaccggggcatcgagttcgagcaggtggaccgggagcgcaactgggacgaccagatc
atcctcagcggcatcctgctctacctgggcgccctctacctgcccggcggccagcgcccg
ccgctctggcgcgccgacggcttcctcctcatcgcactgctccacgccggccccgtcgaa
ttcctctactactggttccaccgcgcgctgcaccaccacttcctctacacgcgctaccac
tcccaccaccactcctccatcgtcaccgagccaatcacatccgtcatccatccatttgct
gagctcgtggcttatgaagtgctgttcgcgatcccattgatcacatgcgccttgactgga
actgcttcaatcgttgcatttgagatctatgtgctctacatcgacttcatgaacaacatg
ggtcactgcaactttgaactggtgccaagttggctcttcaagtggttccctcctctcaag
tatctaatgtacacaccctcattccattctcttcaccacacacagttcaggacaaactac
tccctgttcatgccattctatgattacatatacaacaccatggacaagtcatcggatacg
ctgtatgagaaatcactgaaggccaaagatgaaacagtggatgtggttcatcttacccat
cttaccagcctgcagtccatttatcatatgagacccgggtttgcagaatacgcttctaag
ccttacacttccaagtggtacatgcggatgatgtggcctgtatcatggctttccatggtt
ctgacatggacatacggcacttcattcgctgttgagaggaacctcatgaagaaactcagg
atgcagtcatgggccattccgagatacagtttccattatggattgtcttgggagaaggaa
gcgatcaataacctaatcgaaaaggcaatatgtgaagctgacaagaaaggcgctaaagtt
gttagcctcggactccttaaccaggcacataacctcaatggaaatggagaactttatctg
cagaagtaccctaagttggaggtacgacttgtagatggtaccagcttagctgctgcggtg
gttgtgaacagtattccccaaggcacagatcaagttgttcttgcaggaaatatttcaaag
gttgctcatgctatcgctgcagcattgtgcaagaagaatgtcaaggtagtaatgacaaac
aagcaggattatcatttccttaagcccaacatgccagaagatgcagctgagaaccttttg
ttttcaaaaacacctactgcaaaggtgtggttaattggggagggtctagatgcttctgag
caattcaaggcacagaaaggaacccagtttatcccatattcccagtttccaccaaaaatg
gtacgcaaggacagctgcacctactcaacaactcctgcaatgtctgtgccaaaaacacta
cagaatgtgcactcctgcgagaattggttacctaggagggtcatgagtgcctggcgcatt
gctggaatggttcatgcattggagggatggaacgagcatgagtgcgggaacagtgtgcta
gacatggagaaagtatggtcggctgctcttctgcatggtttctgccctatcgctcaagtt
tga
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