Panicum virgatum (switchgrass): 120690915
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Entry
120690915 CDS
T07260
Name
(RefSeq) cyclin-dependent kinase E-1 isoform X1
KO
K02208
cyclin-dependent kinase 8/11 [EC:
2.7.11.22
2.7.11.23
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pvir01001
]
120690915
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvir03021
]
120690915
Enzymes [BR:
pvir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
120690915
2.7.11.23 [RNA-polymerase]-subunit kinase
120690915
Protein kinases [BR:
pvir01001
]
Serine/threonine kinases: CMGC group
CDK family
120690915
Transcription machinery [BR:
pvir03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
120690915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
YrbL-PhoP_reg
Motif
Other DBs
NCBI-GeneID:
120690915
NCBI-ProteinID:
XP_039829746
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All DBs
Position
9N:49102211..49108333
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AA seq
478 aa
AA seq
DB search
MGDGRAGGANRPAWLQQYELVGKIGEGTYGLVFLARLKPAHPAPGRRGPPIAIKKFKQSK
EGDGVSPTAIREIMLLREINHENVVKLVNVHINHADMSLYLAFDYAEHDLYVCDGEIIRH
HREKLNAPINPYTVKSLLWQLLNGLNYLHSNWIIHRDLKPSNILVMGEGEEHGIIKIADF
GLARIYQAPLKALCDNGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQ
GVEAKNTPNPFQLDQLDKIFKVLGHPTVEKWPTLANLPWWQNDQQHIQGHKYENPGLHNI
VHLPQKSPAFDLLSKMLEYDPRKRITAAQALEHEYFRMDPLPGRKNCFLVSALLPSQPGE
KIVQYPVRPVDTTTDFEGTTSLQPTQPPSGNAAQGQSVPRSMPRQMPQQPMVGMPRVAAG
TNMAAFNAASQAGMAGLNPGNIPMQRGAGGQSHPHQLRRKADQGMMQNPGYPQQKRRF
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgggggacgggcgggcgggcggcgctaaccgcccggcgtggctgcagcagtacgagctg
gtgggcaagatcggcgaggggacctacggcctcgtcttcctcgcgcgcctcaagccggcc
cacccggcgcccggccggcgcggcccccctatcgccatcaagaagttcaagcagtccaag
gagggggacggggtatcgcctaccgcgatcagggagattatgctcctgcgcgagatcaac
cacgagaatgtcgtcaagctcgtcaatgtccacatcaaccacgccgacatgtccctctac
ctcgcatttgattacgcggagcatgacctctatgtctgtgacggtgagattatcaggcat
cacagagagaaactaaacgcccccattaacccctacactgtcaaatccttgctgtggcaa
ctgctcaatggcctcaactatcttcacagcaattggattatccatcgagatctcaagcct
tctaacatactggtcatgggagaaggagaagaacatggaattataaagattgctgatttt
gggcttgctaggatatatcaagctccactgaaagcattgtgtgacaatggagttgttgta
actatctggtatcgtgctcccgagctattacttggggctaaacactacacaagcgctgtt
gatatgtgggcagttggttgcatttttgctgaattgctgaccctgaaaccactgttccaa
ggtgtcgaagccaaaaatactccgaacccattccaacttgatcaactggacaagattttt
aaggtcttaggccaccctacagttgaaaaatggcctacccttgccaatcttccatggtgg
caaaacgaccagcaacacattcagggccataagtatgagaacccaggtctccataacatt
gttcacttgccacagaagagtcctgcatttgatcttctctcaaaaatgcttgagtatgat
cctcgaaagcgtataacagctgcacaagctctggagcatgagtactttcggatggaccca
ctacctggaagaaaaaattgttttctggttagtgcacttttaccatcccagccaggggag
aaaattgtgcaatatcctgttcgtccagtagacactacaacagattttgaaggaacaaca
agccttcaaccaactcagccgccttcagggaatgcagctcaaggtcaatctgtaccaaga
tcaatgccacgacaaatgccgcagcaacccatggttgggatgccaagagtagcagctggt
acaaacatggctgccttcaatgccgcatcgcaggctggcatggctggcctgaatcctggt
aacattcctatgcagagaggcgcaggtggccagtctcatccgcaccagttgagaaggaag
gctgaccaagggatgatgcaaaaccctgggtatcctcagcagaagaggcggttctga
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integrated database retrieval system
