Panicum virgatum (switchgrass): 120690955
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Entry
120690955 CDS
T07260
Name
(RefSeq) 3beta-hydroxysteroid- dehydrogenase/decarboxylase-like
KO
K23558
plant 3beta-hydroxysteroid-4alpha-carboxylate 3-dehydrogenase [EC:
1.1.1.418
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00100
Steroid biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Module
pvir_M00917
Phytosterol biosynthesis, squalene 2,3-epoxide => campesterol/sitosterol
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
120690955
Enzymes [BR:
pvir01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.418 plant 3beta-hydroxysteroid-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
120690955
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Motif
Pfam:
3Beta_HSD
Epimerase
Reticulon
GDP_Man_Dehyd
NAD_binding_4
RmlD_sub_bind
NAD_binding_10
Polysacc_synt_2
NmrA
KR
Motif
Other DBs
NCBI-GeneID:
120690955
NCBI-ProteinID:
XP_039829824
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Position
9N:complement(59862899..59868499)
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AA seq
559 aa
AA seq
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MEAAAAGGGGGRWCVVTGGRGFAARHLVTMLLRSGEWRVRVADLAPAIALDRDEEEGFLG
AALREGQAAYVSADLRDKAQVARAFEGAEVVFHMAAPDSSINNFHLHYSVNVEGTKNVID
ACIRCKVKRLIYTSSPSVVFDGVHGIFNADESMPYPDKFNDSYSETKADGEKLVMRANGR
EGLLTCCIRPSSIFGPGDKLLVPSLVAAARAGKSKYIIGDGNNYYDFTYVENVAYGHICA
EKTLSSEDGAKIAAGKAYFITNMEPIKFWEFMSLILEGLGYERPSIKIPVSVMMPVAHVV
EWTYKKFAKYGMKVPQLTPSRIRLLSCNRTFSCSRAKDQLGYEPIVPLKEGLKRTVESYP
HLRAQNQRSISKASVFLGNGNLAKTLLWEDTKQTVTVLLLLAVIYYHLFTCGYTFITAMA
KLLSLTALFLFIHGMLPANVFGHKVEKLEASNFHITEVEAHRVAHSISSSWNSLVGALRS
LCRGNDWPLFFKVALSLLVVSILSSMSSQAAFKIGTALVFTGFKAYEKWEDTIDSMVGDV
CSILLHIGSTKKSSSQEQM
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcggctgcgggcggagggggcgggaggtggtgcgtggtgactggcggccgc
ggcttcgcggccaggcacctggtgacgatgctgctccgctccggcgagtggcgggtgcgc
gtggccgacctggcccccgccatcgcgctcgaccgcgacgaagaggaggggttcctgggc
gccgcgctccgcgaaggccaggctgcctacgtctccgcggacctccgcgataaggcccag
gtcgccagagcttttgaaggggcagaagtagttttccatatggctgctccagattcatcc
atcaacaacttccaccttcattattcagtcaatgttgagggaacgaaaaatgttattgat
gcttgtatccgttgcaaggtgaagagactcatctacactagttcaccgagtgtcgtattt
gatggagttcatggaatttttaatgcagatgaatcaatgccttacccagataagtttaat
gattcatattcagaaacgaaggcagatggagaaaaactggtgatgagggctaatggtagg
gaagggcttcttacttgttgtatacgcccaagtagcatttttggccctggcgataaacta
ctggttccatctctggttgctgctgcaagggcagggaaatccaaatacattattggtgat
gggaacaactactatgatttcacctatgtggaaaatgtggcatatggtcatatttgtgca
gagaaaactctatcatctgaagatggtgcaaagatagccgctggaaaagcctatttcata
acaaatatggagcccatcaaattctgggagttcatgtcattgattttagaaggtcttgga
tatgaaagaccttcaataaaaatacctgtctctgttatgatgccagtggctcatgttgta
gaatggacttacaagaaatttgccaagtacgggatgaaagttcctcagctgaccccttca
aggattaggctgctctcgtgtaacaggacattcagctgctcaagagcaaaggaccagctt
ggttatgagcccattgtgccccttaaggaaggactgaagagaacagtagaatcatacccc
catctacgagctcagaatcagagaagcatatcaaaggcgtcagttttccttgggaatgga
aatctggcaaaaacattactttgggaagatacgaagcaaacagtgacagtgctactgcta
ttggctgttatctactaccacttgtttacatgtggttacaccttcatcacagctatggca
aagcttttgtcactgactgcattgtttttattcattcatggcatgctgccagcaaatgta
tttggccacaaggttgagaaacttgaggcctcaaattttcacatcacagaggtggaggcc
catcgtgtagctcattccatcagctcgtcttggaactctttagtcggtgctctaagatct
ctttgcagaggaaatgattggccactgtttttcaaggttgcattatctctgttggttgtc
agcattcttagttcaatgtcgtcgcaggctgccttcaaaataggtactgctctggttttc
actggcttcaaagcatatgagaaatgggaggacaccatcgacagcatggttggcgacgtg
tgctctattcttctgcacattggttctactaagaaatcttccagccaggaacaaatgtag
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