Panicum virgatum (switchgrass): 120690993
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Entry
120690993 CDS
T07260
Name
(RefSeq) xanthine dehydrogenase-like isoform X1
KO
K00106
xanthine dehydrogenase/oxidase [EC:
1.17.1.4
1.17.3.2
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00230
Purine metabolism
pvir00232
Caffeine metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01232
Nucleotide metabolism
pvir04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
120690993
09110 Biosynthesis of other secondary metabolites
00232 Caffeine metabolism
120690993
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
120690993
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120690993
Enzymes [BR:
pvir01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
120690993
1.17.3 With oxygen as acceptor
1.17.3.2 xanthine oxidase
120690993
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of breast milk
120690993
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MoCoBD_2
MoCoBD_1
FAD_binding_5
Fer2_2
Ald_Xan_dh_C
CO_deh_flav_C
Fer2
Motif
Other DBs
NCBI-GeneID:
120690993
NCBI-ProteinID:
XP_039829876
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Position
9N:57109591..57141562
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AA seq
1368 aa
AA seq
DB search
MGSLTGSPEGTAAAEAEWSDEAVVYVNGVRRVLPDGLAHLTLLQYLRDIGLRGTKLGCGE
GGCGACTVMVSCYDLTTKKSLHFAINACLAPLYSVEGMHIITVEGIGDRQRGLHPVQECL
AKAHGSQCGFCTPGFVMSMYALLRSSKEPPTEEQIEDCLAGNLCRCTGYRPIIDAFRVFA
KTDNLVYTNSSSQNTDGQAICPSTGKPCSCQNEADANVNSSLPSSVERYSPCSYNEIDGN
SYDDKELIFPPELQLRKVMPLKLKGYNEIRWFRPLKLNQVLHLKSCYPDAKLIIGNSEVG
VETKFKNAQYKVMISVTHVPELNTLKVKEDGIHIGSAVRLAQLQNFLKKVIAERDLPETS
SCQAIVRQLKWFAGTQIRNVASVGGNICTASPISDLNPLWMAIGAKFQITDVNGNVRTTL
AKDFFLGYRKVDIKPNEILLSVILPWTRPFEYVKEFKQAHRREDDIALVNAGMRVYLRET
EGKWIISDVSIVYGGVAAVPLSASKTENFLTGKNWNFELLDDTFNLLKEDIPLSENAPGG
MVEFRRSLTLSFFFKFFLSVTHDMNMKGLLEDGLHADHASAIQPYSRPVAVGTQGYEIVK
QGTSVGQPMVHMSATLQVTGEAEYTDDTPTPPNTLHAALVLSKKAHARILSIDDSIAKSS
PGFVGLFLSKDIPGTNHTGPIIHDEEVFASEVVTCVGQTIGIVVADTHDNAKNAANKVHI
EYSELPAILSIEDAVKNGSFHPNTKRCLGKGDVEQCFMSGACDRIISGEVQVGGQEHFYM
EPQGTLVWPVDSGNEMHMVSSTQAPQKHQKYVANVLGLPLSKVVCKTKRIGGGFGGKETR
SAVFAAAVSVPSYCLRRPVKLILDRDVDMISSGQRHSFLGRYKVGFTNDGKILALDLEIY
NNGGNSLDLSLAVLERAMFHAENVYDISNIRVSGQVCFTNFPSNTAFRGFGGPQGMLIAE
NWIHHIASELQRSPEDIKELNFHNDGTMLHYGQLLQNCKIRSVWDELKASCKFMEARKAV
RSFNSNNRWRKRGIAMVPTKFGISFTAKFMNQAGALVQVYTDGTVLVTHGGVEMGQGLHT
KVAQVAASSFNIPLSSVFISETSTDKVPNASPTAASASSDLYGAAVLDACQQIKARMEPI
ASRGTHNSFAELAQTCYMERVDLSAHGFYATPDIGFDWDDGKGTPFLYFTYGAAFAEVEI
DTLTGDFHTRTADIVMDLGFSINPAIDIGQIEGAFIQGLGWVALEELKWGDQNHKWIRPG
HLFTCGPGAYKIPSVNDIPLNFKVSLLKGAPNPKVIHSSKAVGEPPFFLGSAVLFAIKDA
IFAARADEGHKEWFPLDNPATPERIRMACVDSITKKFANADYRPKLSV
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atgggatcgctcacggggtcgccggagggcacggcggcggcggaggcggagtggtccgac
gaggcggtcgtctacgtcaacggcgtccgccgcgtgctccccgacggcctcgcccacctc
accctgctccagtacctcagagatatcggccttcgagggacaaagcttggatgtggtgaa
ggtggttgtggagcctgcactgtcatggtctcttgctatgacttaactacaaagaaatca
ctgcattttgcaatcaatgcatgcttggctccactttattctgtggaaggaatgcacata
atcacagttgagggaattggagatcgccaacgaggtttgcaccctgttcaggaatgttta
gccaaggcgcatggttcacaatgtgggttctgcacccctggttttgtgatgtcgatgtat
gcactgctgagatctagcaaagagcctcctactgaagaacagatcgaagactgccttgca
ggaaatttgtgtcggtgtactggctaccgaccaattatagatgccttccgtgtttttgcc
aaaacagataatttggtgtacaccaattcatcttcacaaaacacagatggccaagctatc
tgcccttcaactgggaagccatgttcttgccaaaatgaggcagatgccaatgtcaattct
tcactaccatcatctgtggaaagatattcaccttgttcatacaatgaaattgatggaaat
tcatatgatgacaaagaactcatcttccccccagaacttcagttgagaaaagttatgcca
cttaaattaaaggggtataatgagattaggtggtttagacctcttaaactaaatcaagta
ctacatttgaaatcatgctatccagatgcaaagcttatcattggtaactcagaagtggga
gttgaaacaaagtttaagaatgcccaatataaggtcatgatctcagtcactcatgttccg
gagcttaatactctcaaagttaaagaagatggcatacacattggttctgctgtaagactt
gcacagcttcaaaatttccttaagaaggttattgcagaacgtgatttacctgaaacttca
tcatgtcaggcaatagtacgtcagttaaaatggtttgcaggaacacaaatcaggaatgtt
gcttctgttggtggtaacatttgtaccgctagtccaatatcggacctgaatccactttgg
atggctattggtgcaaaattccagataacagatgtgaacggcaatgttcgaactacactc
gcaaaagatttctttcttggttaccgtaaagttgacataaaacctaatgaaatattactt
tctgtcatactaccatggacaaggccttttgaatatgtgaaagaatttaaacaggcacat
agaagggaggatgacattgctttggtaaatgcgggaatgcgtgtgtatttaagagaaact
gaaggaaaatggataatatctgatgtctcaattgtctatggaggggtagctgcagttcca
ctcagtgcttcaaagactgaaaacttccttactggaaagaattggaactttgagttgtta
gatgataccttcaatctgttaaaagaagacatccctctatcagagaatgcacctggtgga
atggttgaattccgcagatcacttactttgagtttcttcttcaaattttttctttctgtt
actcatgatatgaacatgaaaggattgctggaagatggattgcatgctgatcatgcatca
gctatacaaccgtacagtaggcctgttgctgttgggactcaaggttatgaaatagtgaag
caaggaacctcagtaggccagccaatggttcatatgtcagctacgcttcaggtcactggt
gaggctgaatatactgacgacacaccgacaccccctaatactttgcatgctgctctggtg
ctgagtaagaaggctcatgctcgcatattgtcaattgatgattcaattgccaaatcttcc
cctggctttgttgggctgttcctttcgaaagacattcctggtactaaccatactggacca
attattcatgacgaggaggtttttgcatcagaagttgttacttgtgttggtcagacaatt
ggaattgttgtagctgatacccatgataatgcgaaaaatgccgccaacaaagtacatatt
gaatattccgagctaccagcaattttatcaatagaggatgctgtcaagaatggaagcttt
catccaaataccaagcgatgccttggaaaaggcgatgttgaacaatgtttcatgtctggt
gcttgtgacagaatcatatcaggagaagtgcaagttggaggccaagagcatttttacatg
gaacctcaaggcactctggtctggccagttgattctggaaatgaaatgcatatggtctcg
tctactcaagctcctcagaagcatcagaagtatgttgctaatgttcttggtcttccacta
tcaaaagtagtatgcaagactaagcgtattggtggcggatttggtggaaaagaaactaga
tcagcagtattcgctgcagcagtatctgtaccatcatattgtctaagaaggccagtaaag
cttattttggacagagatgttgacatgatatcatctgggcagaggcacagtttcctaggg
agatacaaggtgggatttaccaacgatggaaagatactggccctagacctggaaatttat
aacaacggtggtaattcacttgatctgtcccttgcagtcctggagcgtgctatgtttcat
gcagaaaatgtctatgacatatctaacatcagagtcagtgggcaagtatgctttacaaac
ttcccaagtaacactgctttcagaggttttggtggtccacaaggcatgttgattgcagaa
aattggattcaccatatagcttcagaactccaacgaagtcctgaggacataaaagagctt
aatttccacaatgatggaactatgctgcattatggccagttgctccagaactgtaaaata
aggtcagtatgggatgagctaaaggcatcttgtaagtttatggaagctcgcaaagccgtt
agaagttttaacagtaataatcgatggcggaagcggggaattgccatggttccaacaaaa
tttggcatatccttcactgccaaattcatgaatcaggctggtgcgcttgttcaagtttac
actgatggcactgtcttggtaacccatggtggggttgagatgggacagggtttgcacact
aaggttgcccaagttgctgcttcgtcattcaatatccctcttagctctgtatttatctca
gagacaagtaccgataaggttccaaatgcatcaccaacagcagcctctgccagttcagat
ttatatggagctgcagttttggatgcctgtcagcaaatcaaggctcggatggaacccatt
gctagcaggggaacccacaactcctttgctgagttggctcaaacatgctacatggaacgt
gtggatctctctgctcatggattttatgccacacctgatattgggtttgactgggatgat
ggcaagggaactccattcctttatttcacttatggggctgcatttgccgaagttgagatt
gacactctaactggggattttcacacaagaacagccgatattgttatggacctcggcttt
tcaattaatccagcaattgatattggccagattgaaggagctttcatacaaggtttgggt
tgggtagccttggaagagttaaaatggggtgatcaaaaccacaagtggattcgacctgga
cacctcttcacctgtggacctggcgcttacaaaataccatctgtaaatgacatacctctg
aacttcaaggtttcactattaaagggggctccaaatccaaaggtcatacattcttccaaa
gccgtaggagagccaccgttcttcctcggctctgctgttctctttgcgataaaggacgcg
atcttcgctgcgagggctgatgagggccacaaggagtggttccccctggacaacccggcg
acacctgaaaggataagaatggcgtgtgtcgattccatcacgaagaaattcgccaacgca
gattatcggcccaagcttagtgtataa
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