Panicum virgatum (switchgrass): 120691118
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Entry
120691118 CDS
T07260
Name
(RefSeq) probable UDP-arabinose 4-epimerase 3
KO
K12448
UDP-arabinose 4-epimerase [EC:
5.1.3.5
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
pvir01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
120691118
Enzymes [BR:
pvir01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.5 UDP-arabinose 4-epimerase
120691118
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_10
NAD_binding_4
adh_short
Methyltransf_25
NmrA
KR
Motif
Other DBs
NCBI-GeneID:
120691118
NCBI-ProteinID:
XP_039830024
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Position
9N:67208440..67213278
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AA seq
407 aa
AA seq
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MIPLNRRASLPRAGMEYFDARRKPHNVGKIIAALVLTALCIFVLKQSPSFGGNSVFSRHE
PGVTHVLVTGGAGYIGSHASLRLLKDNYRVTIVDNLSRGNMGAVKALQKLFPQPGRLQFI
FADLGDQKSVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLLILEAMASHG
VKTLIYSSTCATYGEPEKMPITEATPQFPINPYGKAKKMAEDIILDFSKSKGADMAVMIL
RYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGVIPGLKVKGTDYPTADGTCIRD
YIDVTDLVDAHVKALNKAEPRKVGIYNVGTGRGRSVREFVDACKKATGVDIKVEYLNRRP
GDYAEVYSDPTKINKELNWTAQYTDLKESLSVAWRWQKSHPHGYGTN
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgatccctttaaaccggagggcaagcctgcctagggctgggatggagtacttcgatgca
aggcggaagcctcataatgttgggaaaatcattgcagccctggtcctcacagctctctgt
atatttgttctgaagcaatctcctagttttggtggcaatagtgtgttttctcgccatgaa
cctggtgttacccacgtcttagtaacaggaggagctggttatattggatcacatgcctct
ttaaggctcttaaaggataactatcgagttaccattgtggataatctctctagaggaaac
atgggagcagtaaaggctctgcagaagttatttccgcagcctgggaggctacaattcatc
tttgctgatctgggggaccagaaatctgtcaacaagatatttgctgaaaatgcatttgat
gctgtgatgcattttgcagctgttgcttacgtgggtgagagcacactggaaccccttagg
tactatcacaatattacatcaaacaccttactgattttggaggctatggcatcccatgga
gtcaagacccttatctattccagtacatgtgctacctatggagaaccagagaagatgcct
attacagaagccacgcctcagttccctatcaatccatatggaaaagctaagaaaatggca
gaggatatcatattagatttctcaaagtcgaagggagctgatatggctgtcatgatttta
agatatttcaatgttattggatctgaccctgagggaagattaggtgaagctcccaggcca
gaactacgagagcatggtcggatatctggggcatgctttgatgcagcattaggagtcatt
ccaggattaaaggttaaaggaacagattatcctacagctgatggaacctgcataagagac
tacattgatgtcacagatctagttgacgctcatgtgaaagcactcaacaaggcagaacct
agaaaagttggcatttataatgttggaaccggaagaggccgctcggttagagagtttgtg
gatgcctgcaagaaggcaactggggttgacatcaaagttgagtacctcaacagaaggcca
ggagactatgcagaagtatacagcgacccaacaaagatcaacaaggagctcaactggacg
gctcaatacacggacctcaaggagagcctgtcagtcgcatggaggtggcaaaagtcacat
ccacacggctatgggacaaactaa
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