Panicum virgatum (switchgrass): 120694218
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Entry
120694218 CDS
T07260
Name
(RefSeq) indole-3-glycerol phosphate lyase, chloroplastic-like
KO
K13222
indole-3-glycerol-phosphate lyase [EC:
4.1.2.8
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00402
Benzoxazinoid biosynthesis
pvir00999
Biosynthesis of various plant secondary metabolites
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09110 Biosynthesis of other secondary metabolites
00402 Benzoxazinoid biosynthesis
120694218
00999 Biosynthesis of various plant secondary metabolites
120694218
Enzymes [BR:
pvir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.8 indole-3-glycerol-phosphate lyase
120694218
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Gene cluster
GFIT
Motif
Pfam:
Trp_syntA
His_biosynth
PcrB
FMN_dh
ThiG
BtpA
Ribul_P_3_epim
IGPS
NanE
Spore_YtrH
Motif
Other DBs
NCBI-GeneID:
120694218
NCBI-ProteinID:
XP_039833308
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All DBs
Position
Unknown
AA seq
347 aa
AA seq
DB search
MAFTIKIKAASLTSNSTFPPAVHQPSSLITTRAASVAKMPAGRRKAAAIIRAVAAVAPRP
APTPAKPAGKRCLSVSQTMSRIKAQGKTAFIPYITAGDPDLATTAEALRLLDACGADVIE
LGMPFSDPYADGPVIQASAARALASGTTTDGVLAMLKEVTPELSCPVVLFSYINPIIRWG
LAEFTAAAKEAGVDGLIVPDLPYAGTCSLRSEAMKNNLELVLLTTPATPEERMKEITRAS
EGFIYLVSVNGVTGPRANVSTRVESLIQEVKKVTNKPVAVGFGISKPEHVKQIAEWGADG
VIIGSAMVRQLGEAISSQEGLKRLEDYARSMKNALPRSQTSTRGPDN
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggctttcacgatcaagatcaaagctgcgtcgttgacctccaactcgacttttcccccg
gcagttcaccagccatcgtcgctcatcacgacgcgggcggcgtcggttgcgaagatgcca
gctgggcggaggaaggctgcggcgatcatcagggcagtcgccgcggtggctccgcggcct
gccccgacgccggccaaacccgcgggcaagcggtgcctgtcggtgtcgcagaccatgtcc
aggatcaaggcgcagggcaagacggcgttcatcccgtacatcaccgccggcgaccccgac
ctggccacgacggcggaggcgttgcggctcctggacgcctgcggcgccgatgtcatcgag
ctcggcatgcccttctccgacccttacgccgatgggcccgtcatccaggcatcggcggcg
cgcgcgctggcgagcggcacgacgacagacggtgtgctggcgatgctcaaggaggtgacg
ccggagctgtcgtgcccggtggtgctcttctcctacatcaaccccatcatccggtggggg
ctggctgaattcactgctgccgccaaagaagccggtgtagatggtctgatagtccccgac
ctcccttatgctggcacttgttccctcaggagtgaagccatgaagaacaacctcgagctg
gtgctgctcacaacaccagctacgccggaagagaggatgaaggaaatcacaagagcttca
gaaggttttatttaccttgtgagcgtcaatggcgttacaggtccccgcgcaaatgtgagc
acacgtgtcgaatctctcattcaagaggttaaaaaggtcactaacaaacctgtggctgtt
ggatttggcatatcgaaacctgagcacgtaaagcagattgcggagtggggagctgatggg
gtgataattggcagtgcaatggtgagacagttgggtgaggcaatatcttcacaagaaggg
ctgaaacggctggaggattatgctaggagcatgaagaacgcattgccacgaagccagact
agtactagagggccagataattaa
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