Panicum virgatum (switchgrass): 120694493
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Entry
120694493 CDS
T07260
Name
(RefSeq) probable LL-diaminopimelate aminotransferase, chloroplastic isoform X1
KO
K10206
LL-diaminopimelate aminotransferase [EC:
2.6.1.83
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00300
Lysine biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01230
Biosynthesis of amino acids
Module
pvir_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
120694493
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pvir01007
]
120694493
Enzymes [BR:
pvir01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.83 LL-diaminopimelate aminotransferase
120694493
Amino acid related enzymes [BR:
pvir01007
]
Aminotransferase (transaminase)
Class I
120694493
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Alliinase_C
Motif
Other DBs
NCBI-GeneID:
120694493
NCBI-ProteinID:
XP_039833559
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Position
2K:64104680..64110672
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AA seq
469 aa
AA seq
DB search
MAAAPASSAAAMAAAPAITASSSFVSSSPCSLRVSKTSPRRPTGRVSHKISCVSSPPAAE
TSYKTSVPRNANMAKLQAGYLFPEIARRRAAHLLKFPDAKIISLGIGDTTEPIPDVITNA
MAERAHALSTIDGYSGYGAEQGEKKLRSAIAATYYVDLGIEDSDIFVSDGAKCDISRLQV
LFGSNVTIAVQDPSYPAYVDSSVIMGQTGLYQQDVQKYGNIEYMRCNPENGFFPDLSTVP
RTDIIFFCSPNNPTGAAASRDQLTRLVKFAKDNGSIIVYDSAYAMYISDDSPKSIFEIPG
AREVAIETASFSKYAGFTGVRLGWTVVPKELLFSDGHPVAKDFNRIVCTCFNGASNIAQA
GGLACLSPEGLKAMHDVVGFYKENTEIIVDTFTSLGFNVYGAKNAPYVWVHFPGRNSWDV
FAEILEKANVVTTPGSGFGPGGEGFVRVSAFGHRENIIEAARRLKQLYK
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcccccgcctcttctgccgccgctatggccgcggcacccgcaatcaccgcg
tcctcctcctttgtctcgtcgtcgccgtgctctctcagggtgtcgaagacaagcccccgg
cgacccacgggaagagtgtcccacaaaatcagctgcgtcagtagcccaccggccgccgaa
acatcttacaagactagtgtcccgcgcaatgctaacatggccaagctccaagcaggatat
ttatttcctgagattgccaggagaagagcagctcatttgctcaagttccctgatgctaag
attataagccttgggataggtgacactacggagcccattccagatgtcataacgaatgcc
atggcagagagagcacatgccttatcaacaattgatggctacagtggttatggagctgag
caaggtgaaaagaaactaaggtcagcaattgctgcaacctactatgtggaccttggtatt
gaagattcagacatatttgtctctgatggtgccaaatgtgacatttcccgcctgcaggtt
ctttttggatctaatgtgacgattgcggtccaagacccatcataccctgcatatgttgat
tcaagtgttatcatgggccaaactggcttatatcagcaagatgttcagaagtacgggaac
atcgagtacatgagatgcaatcctgaaaatggatttttccctgatctgtcaactgtccca
cgtacagatataattttcttttgctcaccgaacaaccccactggtgctgctgcctctcgg
gaccaactgacgagactagtcaaatttgctaaggacaatgggtctatcattgtctatgat
tctgcctatgctatgtacatatcagatgatagcccaaagtctatctttgaaattcctggt
gcgagagaggttgccattgagacagcatcattctcgaaatatgctgggttcactggtgtc
cgtctaggttggactgttgtccccaaggagcttcttttctcagatgggcatccagtcgct
aaagatttcaaccgcattgtgtgcacctgcttcaatggcgcatcaaacattgctcaagct
ggtggcttagcttgcctctctccagagggtctgaaggctatgcatgatgttgttggcttc
tacaaggagaatactgaaataattgtcgacacgtttacatcgcttggattcaatgtatat
ggtgccaagaacgctccttatgtgtgggtgcacttccctggtcgcaattcgtgggatgtg
ttcgctgagatccttgagaaggcgaacgttgtcactacgcctggcagtggatttggacct
ggcggcgaaggctttgtgagggtcagcgcgtttggccacagagaaaacatcattgaagcc
gctaggagattaaaacagctgtacaagtga
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