Panicum virgatum (switchgrass): 120698423
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Entry
120698423 CDS
T07260
Name
(RefSeq) phosphatidate phosphatase PAH1-like
KO
K15728
phosphatidate phosphatase LPIN [EC:
3.1.3.4
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00561
Glycerolipid metabolism
pvir00564
Glycerophospholipid metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Module
pvir_M00089
Triacylglycerol biosynthesis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00561 Glycerolipid metabolism
120698423
00564 Glycerophospholipid metabolism
120698423
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pvir01009
]
120698423
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.4 phosphatidate phosphatase
120698423
Protein phosphatases and associated proteins [BR:
pvir01009
]
HAD phosphatases
Other HAD phosphatases
120698423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LNS2
Lipin_N
Lipin_mid
APP1_cat
Motif
Other DBs
NCBI-GeneID:
120698423
NCBI-ProteinID:
XP_039837954
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All DBs
Position
3K:22780784..22787358
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AA seq
1053 aa
AA seq
DB search
MNVVGRVGSVISQGVYSVATPFHPFGGAVDIIAVEQPDGSYRSTPWYVRFGKFQGVLKGA
EKVVTITVNGVEASFHMHLDNSGQAYFMRELVPGSEDSGTGSEEEASNEPEPPARSKSDG
DLYIGPSDRLGSQELNVEHQEKQTRDEFESFDGYGRLEEAEDLQNQADGENSEVVLVSVD
GHVLTAPISSTDEGMEDVQLSDPQFHLGPGQSSGGDFSRSGEVWDAGILDDLYISQEKVK
FDSEHQSKVLTGNGEVPIEKDELHHISVDEDEKLHVSVNEVEALYVSVSEDKVHAVSRNE
DEAQVVSTNEDEVQDVSMSGNNDEVYQPITSEGESCGVSGDINVGYQPLTSEDESPGVSG
DNDVSNEDEIQDVTRSGNNDEVYQPVTSEGESCGVSGDISVGYQPLTSEDDSPALSGEND
VGYQPSTKAHKAHDIPENNDEDHQPLTNEDESSDASVLERAKNLPANKDGVCDLNNKDND
LEDTGANFAKNDTFQSCLDLTSQVDDGDSGNELFSPGSDYQRDSELSLGNCSVAETYLEE
CETKTAYSDQDGRLQEGVDASIFTLGVDRTRNKRSSSHYGKGFDLFSEGGSHDKELASET
EAAGSDGLQSSIANSDKDKLGSIPEHSEEEEQTKEEHSQTQKGLGVEISLCGNMLRPGMG
RESAEEAFQQHLVREEDFKSSGSTIIKNANLIVKVDNKYFPWSKVSHVILGKAVFGSNFT
IEPSDAIRVERQETPNSREDSLRMSPSRRRWRLWLNPFRITRSLQRSNSDSSEDIFLDSE
TVLSPMDEQALENKSQSPRKQFVRTLIPTSEQVASLNLKEGQNLVTFSFCTRVLGKQQVD
AHIYLWKWNAKIVISDVDGTITRSDVLGQVMPLVGRDWSHSGVARLFSAIKENGYQLLFL
SARAIVQAYLTKNFLFNLKQDGKALPNGPVVISPDGLFPSLYREVIRRAPHEFKIACLED
IKALFPSDYNPFYAGFGNRDTDELSYKKMGIPKGKIFIINPKGEVAVNSSVDVKSYTSLH
TLVNDMFPPTTLVEQEDYNNWNYWKVPLPDVDL
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtggtgggaagggttggatctgtgatctcgcagggagtgtactctgttgcaacg
cccttccacccatttggtggcgcagttgacatcattgcagttgagcagcctgatggttca
taccgcagcacaccatggtatgtccgttttgggaagttccagggggtgctcaagggtgct
gagaaggtcgttaccatcaccgtaaatggcgttgaagccagctttcacatgcaccttgac
aactctggccaagcctatttcatgcgtgagcttgtgcctggcagcgaagactctggtaca
ggttcagaagaagaagctagcaatgagcctgaacctccagcgcgtagtaagagtgatggg
gacctttacattggtcctagtgacaggcttggtagccaagagttgaatgtggagcatcaa
gagaagcaaaccagggatgagtttgagtcatttgatggttatggcaggttggaggaagca
gaagatttacaaaaccaagctgatggggaaaattcagaggtggttctggttagtgtggat
ggacatgtgctcacggctcctatttcttcaacagatgaaggtatggaggatgtgcagtta
agtgacccgcagttccatttgggacctgggcagagctctggtggggacttcagccgcagt
ggtgaggtgtgggatgctggcattttagatgatttatacatatcacaggaaaaggtaaaa
tttgattctgaacatcagtcaaaggttttaacagggaatggagaggtaccaattgagaag
gatgagttacatcacatctcagttgacgaagatgaaaagctccatgtgtctgtcaatgaa
gttgaagcgctctatgtgtcagttagtgaagataaagttcatgctgtgtctagaaatgaa
gatgaagctcaagttgtgtctacaaacgaagatgaggttcaagatgtgtcaatgtcaggg
aacaatgatgaggtttatcaacccataaccagtgaaggtgagtcttgtggggtttcaggg
gacattaatgtgggttatcaacccttgaccagtgaagacgagtctcctggtgtctcaggg
gacaatgatgtgtcaaacgaagatgagattcaggatgtgaccaggtcagggaacaatgat
gaggtttatcaacctgtaaccagtgaaggtgagtcttgtggtgtttcaggggacattagt
gttggctatcaacccttgaccagtgaagacgactctcctgctttatcaggggagaatgat
gtgggttatcaaccctcaaccaaggcacataaagctcatgatataccagagaacaatgat
gaggatcatcaacccttgaccaatgaagatgaatctagtgatgcctcagtgctcgaaaga
gccaagaatctcccagctaacaaggatggagtttgtgacctcaacaacaaagacaatgat
ttggaggatactggtgctaattttgctaaaaatgacacttttcagagctgcttggatcta
acatcacaagtagatgatggggattcaggaaatgaattattttctcctggatccgattat
cagagggactctgagcttagtttgggtaattgttctgttgctgagacatatctagaggaa
tgtgaaactaaaactgcttactctgatcaagatggtcgattacaggagggagtggatgct
tcaatatttaccttaggagttgataggactcgaaacaaaaggagctcttctcattatggc
aagggatttgacttgttctctgaaggaggttctcatgataaggaacttgcctctgaaact
gaggctgctggatccgatggtttacaatcatccatagctaacagtgataaagacaaactg
gggagcattccagagcactcagaagaggaggaacagactaaagaagaacattctcagaca
caaaagggcttgggggttgagatttctctttgtgggaacatgttacgaccaggaatgggt
cgagaatctgctgaggaggcctttcaacagcatcttgtccgcgaggaggatttcaagtca
tctggatcaacaattataaaaaatgcaaaccttatcgtcaaagttgacaataagtacttc
ccatggagtaaagtttctcatgtcattcttgggaaggctgtatttggttcaaacttcacc
atagaacctagtgatgcaattcgggtggaacgtcaggaaacacccaattcaagagaagac
tctcttagaatgtctccctcaagacgtagatggaggctttggctcaatccctttcggata
acacggtctcttcagcgtagtaacagtgattcttctgaggacattttccttgactcagag
actgttttgagtccaatggatgaacaagctctggagaacaaaagccagtcaccaagaaag
caattcgtccggacattgattcccactagtgaacaggtagcatctttaaatctgaaggag
ggccaaaacttggtgacgtttagcttctgcaccagagttcttgggaagcagcaggttgat
gcacatatttacttgtggaaatggaatgctaaaattgtgatatctgatgtggatggcacc
ataacaaggtctgatgtgttgggtcaagtcatgcctttggttggaagagattggagtcac
tccggtgtcgcacgacttttttctgcaataaaggaaaacggttatcaactgctattcctt
agtgccagagcaattgttcaggcatatctcacaaagaacttcctcttcaatctgaaacaa
gatgggaaagcgctgcccaatgggcctgttgtaatttcacctgatggtttgtttccttca
ctgtaccgagaagttatacggagagccccacatgaattcaagattgcatgtctggaggac
attaaggctctttttccttctgattacaatccattttatgctgggtttggcaacagagac
actgatgagctcagttacaagaagatgggaatacctaaaggcaagatttttatcatcaac
ccgaagggagaagtggctgtcaacagttctgttgatgtgaagtcttatacctccttacat
acccttgtcaatgacatgtttccaccaactactctggttgaacaggaagactacaataac
tggaattactggaaggtgccactgccagatgttgacttgtag
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