Panicum virgatum (switchgrass): 120703101
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Entry
120703101 CDS
T07260
Name
(RefSeq) indole-3-glycerol phosphate lyase, chloroplastic-like
KO
K13222
indole-3-glycerol-phosphate lyase [EC:
4.1.2.8
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00402
Benzoxazinoid biosynthesis
pvir00999
Biosynthesis of various plant secondary metabolites
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09110 Biosynthesis of other secondary metabolites
00402 Benzoxazinoid biosynthesis
120703101
00999 Biosynthesis of various plant secondary metabolites
120703101
Enzymes [BR:
pvir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.8 indole-3-glycerol-phosphate lyase
120703101
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Motif
Pfam:
Trp_syntA
His_biosynth
PcrB
ThiG
BtpA
FMN_dh
NMO
IGPS
Ribul_P_3_epim
NanE
Motif
Other DBs
NCBI-GeneID:
120703101
NCBI-ProteinID:
XP_039843050
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Position
4K:complement(11363990..11367447)
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AA seq
334 aa
AA seq
DB search
MAFAVKAASTSQWTLSPAVHQPSSLTTRAAASVAKMPAGRRNAAAAVIRAVAALAPPPAP
APPRPAGKRCLPLSQTMSRLKARGKTAFIPYITAGDPDLATTAEALRFLDACGADVIELG
LPFSDPDADGPVIQASAARALASGTTMDGMLAMLKEVKPELSCPVVLFSYFNPIVRWGLA
DFTAAAKEAGVDGLIVPNLPYAATYDLRSEAMKNNLELVLLTTPSTPEERMKEITRASEG
FIYLVSVDGVTGPRANVSTRVESLIQEVKQVTDKPVAVGFGISRPEHVKQIAEWGADGVI
IGSAMVKQLGEAASPKEGLKRLEDYTMSMKNALP
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggctttcgcggtcaaggctgcatcgacctcccagtggactttgtccccggcggttcat
cagccgtcatcgctcacgacgcgggcggcggcgtcggtcgcgaagatgccggcggggcgg
aggaatgctgcggcggcggtcatcagggcggttgccgccttggctccgccgcctgccccg
gcgcctcccaggccagcgggcaagcggtgcctaccgttgtcgcagaccatgtccaggctc
aaggcgcggggcaagacagcgttcatcccgtacatcaccgccggtgaccccgacctagcg
acgacggcggaggcgctgcggttcttggacgcctgcggtgctgacgtcatcgagctcggc
ctgcccttctccgaccccgacgccgacgggcccgtcatccaggcctcagcagcgcgggcg
ctggcgagcggcactacgatggatggcatgctggcgatgctcaaggaggtgaagccggag
ctgtcgtgcccggtggtgctcttctcctatttcaaccccatcgtccggtgggggctggct
gacttcaccgccgccgccaaagaagccggtgtagacggtctgatagtccccaacctccct
tatgctgccacctatgacctcaggagtgaagccatgaagaacaacctcgagctggtgctg
ctcacaacaccatctacaccggaagagcggatgaaggaaatcacaagagcttctgaaggt
tttatttatcttgtgagtgtcgatggcgttacaggtccccgcgcaaacgtgagcacacgt
gtcgaatctctcattcaagaggttaaacaggtcactgacaaacccgtggctgttggattt
ggcatatcaagacctgagcatgtaaagcagattgcggagtggggagctgatggagttatc
atcggcagtgcaatggtgaaacagttaggcgaagcagcatctcccaaagaaggtctaaaa
cggctagaggattacaccatgagcatgaagaatgcattaccatga
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