Panicum virgatum (switchgrass): 120703106
Help
Entry
120703106 CDS
T07260
Name
(RefSeq) indole-3-glycerol phosphate lyase, chloroplastic-like
KO
K13222
indole-3-glycerol-phosphate lyase [EC:
4.1.2.8
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00402
Benzoxazinoid biosynthesis
pvir00999
Biosynthesis of various plant secondary metabolites
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09110 Biosynthesis of other secondary metabolites
00402 Benzoxazinoid biosynthesis
120703106
00999 Biosynthesis of various plant secondary metabolites
120703106
Enzymes [BR:
pvir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.8 indole-3-glycerol-phosphate lyase
120703106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trp_syntA
His_biosynth
PcrB
BtpA
ThiG
FMN_dh
IGPS
NMO
NanE
TMP-TENI
Ribul_P_3_epim
Motif
Other DBs
NCBI-GeneID:
120703106
NCBI-ProteinID:
XP_039843054
LinkDB
All DBs
Position
4K:complement(11406634..11407917)
Genome browser
AA seq
182 aa
AA seq
DB search
MLKEVKRELSCPVVLFSYFNPIVRWGLADFTAAAKEAGVDGLIVPNLPYAATYDLRSEAM
KNNLELVLLTTPSTPEERMKEITRASEGFIYLVNVDGVTGPRANVSTRVESLIQEVKQVT
DKPVAVGFGISRPEHVKQIAEWGADGVIIGSAMVKQLGEAASPKEGLKRLEDYTMSMKNA
LP
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaggaggtgaagcgggagctgtcgtgcccggtggtgctcttctcctatttcaac
cccatcgtccggtgggggctggctgacttcaccgccgccgccaaagaagccggtgtagac
ggtctgatagtccccaacctcccttatgctgccacctatgacctcaggagtgaagccatg
aagaacaacctcgagctggtgctgctcacaacaccatctacaccggaagagcggatgaag
gaaatcacaagagcttctgaaggttttatttatcttgtgaatgtcgatggcgttacaggt
ccccgcgcaaacgtgagcacacgtgtcgaatctctcattcaagaggttaaacaggtcact
gacaaacccgtggctgttggatttggcatatcaagacctgagcatgtaaagcagattgcg
gagtggggagctgatggagttatcatcggcagtgcaatggtgaaacagttaggcgaagca
gcatctcccaaagaaggtctaaaacggctagaggattacaccatgagcatgaagaatgca
ttaccatga
DBGET
integrated database retrieval system
