Panicum virgatum (switchgrass): 120703685
Help
Entry
120703685 CDS
T07260
Name
(RefSeq) acyl-coenzyme A oxidase 3, peroxisomal-like
KO
K00232
acyl-CoA oxidase [EC:
1.3.3.6
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00071
Fatty acid degradation
pvir00410
beta-Alanine metabolism
pvir00592
alpha-Linolenic acid metabolism
pvir00640
Propanoate metabolism
pvir01040
Biosynthesis of unsaturated fatty acids
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01200
Carbon metabolism
pvir01212
Fatty acid metabolism
pvir04146
Peroxisome
Module
pvir_M00087
beta-Oxidation
pvir_M00113
Jasmonic acid biosynthesis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
120703685
09103 Lipid metabolism
00071 Fatty acid degradation
120703685
00592 alpha-Linolenic acid metabolism
120703685
01040 Biosynthesis of unsaturated fatty acids
120703685
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
120703685
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
120703685
Enzymes [BR:
pvir01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.3 With oxygen as acceptor
1.3.3.6 acyl-CoA oxidase
120703685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACOX
Acyl-CoA_dh_M
Acyl-CoA_dh_1
Acyl-CoA_ox_N
Motif
Other DBs
NCBI-GeneID:
120703685
NCBI-ProteinID:
XP_039843772
LinkDB
All DBs
Position
4K:complement(32648262..32661341)
Genome browser
AA seq
688 aa
AA seq
DB search
MDPAVSPAGRRAAAIARHLAAGALPVPPPLAAAAALLGPSPCLSYAPPESAENAPAFPPT
ELRALLDGHHLMERDWVFRVMEESQLFCPRQRGGGSRVFVAPDYNDGKEAQREATMRRIA
HLAQRGVFRGWLTEPGAEVELRKLALLECLGVYDHSLAIKIGVHFFLWGSAIKFLGTKRH
HDKWLLATENYDVKGCFAMTELGHGSNVRGIETIATYDSKAREFIINTPCESAQKYWIGG
AANHATHTIVFSQLHINGKSEGVHAFLAQIRDEDGNVLPDIHIADCGHKIGLNGVDNGRI
WFQNIRVPRENLLNFVADVLPNGQYVSVIDDPDQRFAAFLSPLTLGRVNIAVNSVYISKV
GLAIAVRYGLSRRAFSLTPDDPEMLLLDYPSHQRRLLPLLAKVCLMSSAGNFMKKMYVKR
TPEMSKAIHIYSSALKATLTWQNMITLQECREACGGQGLKTENRIGIFKAEFDVQSTFEG
DNNVLMQQVSKALYAEFLAAQKKKKPFKGLGLEHLNGQNPVIPDKLTSSILRSSKFQMDL
YCLRERDLLKQFTEEVSLHLAQGKSREKALMLSYQLAEDLARAFTERTILQIFLADEMNV
PSGSLKEVLLLLRSLYVMVSIDESVSFLRYGYLSRDNVASVRNEVLKLCSELKPHALAVV
SSFGIPDAFLSPLAFDWIEANALSTGSH
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggaccccgccgtgtcccccgccggccggcgcgcggccgccatcgcgcggcacctcgcc
gccggcgcgctccccgttccaccgcccctcgctgccgcggccgcgctgctgggcccctcc
ccttgcctcagctacgcgccgccggagtcggccgagaacgcgccggctttcccgcccaca
gagctccgtgcgctacttgacgggcaccatctcatggagcgcgactgggtgtttcgcgtc
atggaggagagccagctattttgcccgcgtcagcgtggcggcgggagtagggtcttcgtg
gcgccggattacaacgacgggaaggaggcgcagcgggaggccacgatgcggcgcatcgcg
cacctggcgcagcgaggtgtgttccgcgggtggctcaccgagcccggagccgaggttgag
ctccgcaagctcgcgctgctcgagtgcctaggtgtctacgaccactccctcgccatcaag
atcggcgtccacttctttctctggggcagtgctatcaagtttcttggaacaaagcgccac
catgacaagtggttgttggccacggaaaattatgatgtcaagggttgttttgcaatgaca
gaactaggccatggaagcaatgtgcgaggaatagagacaatagcaacttatgattcaaaa
gcaagagagtttatcataaatactccatgtgaatcagctcagaagtactggattggtgga
gctgctaaccatgcgacgcatacaatagtcttttctcaactccatataaatgggaaaagt
gaaggagtccatgcttttctggctcaaattagggatgaagatggaaatgtattgcctgat
atccatatagctgactgtggccataagattggattgaatggtgttgataatggccggatt
tggtttcagaatatacgtgttcctcgcgagaacttgcttaattttgttgctgatgttttg
ccaaatgggcaatatgttagcgtgatagatgatccggatcagaggtttgcagctttcctt
tctccacttacacttggtcgagtaaatattgcagttaactcagtctacatttcaaaggta
ggcttagcaattgctgtgagatacggtttgtcgaggagggccttttcattaacaccagat
gatcctgaaatgttgttgcttgattatcccagtcaccagcgacgccttctaccactgcta
gcaaaagtatgtctgatgagcagtgctggtaattttatgaaaaagatgtatgtcaagaga
actcctgaaatgagcaaagccatacacatttattctagtgccctgaaggccacactaact
tggcagaatatgattacacttcaggagtgtcgtgaagcctgtggaggccaaggtctaaag
actgagaaccgcataggaattttcaaagctgaatttgatgtccagtccacatttgagggt
gataataatgttctaatgcagcaggtaagcaaagcactttatgctgaatttttggctgca
caaaagaagaagaagccattcaagggattgggattggaacacttaaatggtcagaaccct
gttattcctgataagctgacaagtagcatattaaggagctccaagttccagatggacctg
tactgcttaagggagagagatttactaaagcagttcacggaggaggtttctctccatctc
gcacaaggaaaaagcagagaaaaggctttgatgctgagctaccaacttgctgaagattta
gctagagcttttactgagcgtacaatcctccaaatatttttggcagacgagatgaatgtt
ccttctggttccctaaaggaggtgctgctcttgctgaggtctctgtatgttatggtcagc
atagatgaatctgtgtctttcttaagatatggatatttgtcacgtgacaacgtagccagt
gtgcggaatgaagtcctgaaactgtgcagtgaactcaagccccatgcgcttgctgttgtc
agttcttttggaatccctgatgcattccttagtccacttgcttttgactggattgaggca
aatgctctgtcaactgggagccactaa
DBGET
integrated database retrieval system
