Panicum virgatum (switchgrass): 120704924
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Entry
120704924 CDS
T07260
Name
(RefSeq) (R)-mandelonitrile lyase-like
KO
K08248
(R)-mandelonitrile lyase [EC:
4.1.2.10
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00460
Cyanoamino acid metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
120704924
Enzymes [BR:
pvir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.10 (R)-mandelonitrile lyase
120704924
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Motif
Pfam:
GMC_oxred_C
GMC_oxred_N
FAD_binding_2
Pyr_redox_2
NAD_binding_8
HI0933_like
Motif
Other DBs
NCBI-GeneID:
120704924
NCBI-ProteinID:
XP_039845397
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Position
4K:42136103..42138929
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AA seq
586 aa
AA seq
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MAAVSARLRLLHLLLGVLLVPSLAAAQPRAFGGAPPVYARYLVDAAAMPAVELYNYIVVG
GGTAGCPLAATLAGPGGGRVLLLERGGAPSEFPALATAGGFVRTLAMADPAPESDAPAQG
FTSEDGVPNVRARVLGGGTAINAGFYSRAHPEWFRGHAEDGEVTSWDMRLVNASYEWVER
HLTFQPAVRGFQAAVRAALLEANVTPWNGFTVDHVAGTKVGATTFDASGRRHSAADLLAF
ARPSRLRVAIRATVTRIITNPIDPAARHGRSPQPTIAAIGVVYQDRLLDQHQALLRPGGE
VILSAGALGSPQLLLLSGIGPASDLSYLGIPVSADIPDVGKHMFDNPRNGISIIPSVPID
HSLIQVVGIPSANGAASYLEAASYIVPLAPALRSAGPFIGSSSPLYVTVATIMEKVPGPL
SEGSLWLSSTNPLESPPLRFNYLSRPEDLARCVLGVRRVAEVLEGRALDGFRSPVGSANR
RGAARRDFRIVGMELPVEWRTDDRALADYCQQTVATLWHYHGGCVAGKVVDRDFRVIGTR
ALRVVDASTFSETPGTNPQATVLMMGRYVGLKMIEERHSRRPVIPS
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggccgcagtctccgcgcggctccgcctcctccacctcctcctcggcgtcctcctcgtg
ccgtccctcgccgccgctcagccccgagctttcggaggggcgccgccggtgtacgcgcgg
tacctggtcgacgcggcggcgatgccggcggtggagctgtacaactacatcgtggtgggc
ggcggcacggcggggtgcccgctcgcggcgacgctggcgggtcccggcggcgggcgcgtg
ctcctgctcgagcgcggcggcgcgcccagcgagttcccggcgctcgccacggccggcggg
ttcgtccggacgctcgccatggccgacccggccccggagtccgacgcgcccgcgcagggg
ttcacgtccgaggacggcgtccccaacgtgcgcgcgcgcgtgctcggcggcggcaccgcc
atcaacgccggcttctactcccgcgcgcacccggaatggttccgcggccacgccgaggac
ggcgaggtgacgagctgggacatgcggctggtgaacgcgtcgtacgagtgggtggagagg
cacctgacgttccagccggcggtgcgcgggttccaggcggcggtgagggcggcgctgctg
gaagccaacgtcacgccgtggaacggcttcacggtggaccacgtcgccggcaccaaggtc
ggcgccaccaccttcgatgcgtcgggccggcggcacagcgccgcggacctgctcgccttt
gcccgtcctagccgtctccgtgtcgccatccgtgccacagttacccgtatcatcaccaac
ccgattgaccctgctgcacgccatggaaggtctccacaaccaacaatagcagcaattggc
gttgtgtaccaggaccgtctcctcgatcagcaccaagccctcctgcgcccaggtggggag
gttatactttcagcaggtgccctggggagtccccagttgcttcttctcagtggcattggc
cctgccagcgatctttcctacctcggcatccctgtctctgccgatatccctgatgttggc
aagcacatgttcgacaaccctcgcaacggcatctccatcatcccgtcagtcccgatcgat
cactccctcatccaggtcgtcggcatcccttcagctaatggagctgcctcctaccttgag
gcggcatcatacattgtcccgcttgctccggcgttgagatcagctggtcctttcatcggc
tcgtcttcaccactctatgtcactgtggcaactatcatggaaaaggtccctgggccttta
tctgaaggttcgctatggctttcgtcaacaaatccattggagagcccccctctgcggttc
aactacttgagccgccctgaggacttggcgcgatgcgtcctgggagtgcgccgtgttgca
gaagtgctcgaaggcagagcattggatggattccgctcaccggtcggatcggcgaacagg
agaggggcagctaggagggatttcaggattgttgggatggagctgccggtagaatggaga
acagatgacagagctctagcagattactgccagcagaccgtggcaacgctatggcattat
catggagggtgtgtcgccgggaaggtggttgatagagatttccgggtaattggcacccgt
gcacttcgtgtggttgatgcttcaacattcagtgagacacctgggacgaaccctcaagct
acagtcttgatgatgggcaggtatgtggggctgaagatgattgaggagagacacagcaga
aggccagttataccatcatag
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