Panicum virgatum (switchgrass): 120705759
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Entry
120705759 CDS
T07260
Name
(RefSeq) glutamine--tRNA ligase-like
KO
K01886
glutaminyl-tRNA synthetase [EC:
6.1.1.18
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00970
Aminoacyl-tRNA biosynthesis
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120705759
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pvir01007
]
120705759
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvir03016
]
120705759
Enzymes [BR:
pvir01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.18 glutamine---tRNA ligase
120705759
Amino acid related enzymes [BR:
pvir01007
]
Aminoacyl-tRNA synthetase
Class I (A)
120705759
Transfer RNA biogenesis [BR:
pvir03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
120705759
Prokaryotic type
Other AARSs
120705759
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1c
tRNA_synt_1c_R1
tRNA-synt_1c_C2
tRNA-synt_1c_C
tRNA_synt_1c_R2
Motif
Other DBs
NCBI-GeneID:
120705759
NCBI-ProteinID:
XP_039846198
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All DBs
Position
5K:4285910..4292014
Genome browser
AA seq
796 aa
AA seq
DB search
MGTGGDGEKSAPALPLEALLALGLDQRTAENALVNSKVTANLAAVIAEAGIKECDKSVGN
LLYAVATKYPTNALVHRPVLIKYVLSTKIKNPAQLDGALSFLSNTGPDSLDVKKFEEACG
VGVVVSIEEIKSTVTDVLEENMEAIKEQRYHINVGTLCGQVRKRHPWGDAKAIKEEIDNR
LAEILGPKTEADNIKPVKKKKEKPAKVEEKKDAVATSAPPSEEELNPYTIFPQPEENFKV
HTEIFFSSGNIWRAHNTKEILEKHLKATGGKVMTRFPPEPNGYLHIGHAKAMFIDFGLAK
ERNGHCYLRFDDTNPEAEKKEYIDHIQEIVHWMGWEPYKVTYTSDYFQALYEHAIELIRK
GLAYVDHQTAEEIKEYRDKKMNSPWRDRPIEESLKLFEDMRRGLIAEGAATLRMKQDMQN
ENKNMSDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCMVDSLENITHSLCTLEFDIRRPSY
YWLLVALGLYQPYVWEYSRLNISNTVMSKRKLNRLVTEKWVDGWDDPRLLTLAGLRRRGV
SSTAINSFIRGIGITRSDNSLIRVDRLEYHIREELNKTAPRTMVVLRPLKVVITNLEEGK
VLDLDGKMWPDASDTDASSHYKVPFSRTVYIEKTDFRLKDSKDYYGLAPGKSVMLRYAFP
IKCTDVIYGDSPDDIVEIRAEYDPLKTSKLKGVLHWVAEPTPGVEPLKVEVRLFEKLFMS
ENPAELEDWLGDLNPNSKEVIKDAYAVPSLATAVLGDKFQFERLGYFAVDTDSTPEKLVF
NRTVTLRDSFGKSGPK
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccgggggagatggggagaagtcggcgcccgcgctgccgctggaggcgctgctg
gcgctcgggctcgaccagcgcaccgcggagaacgcgctcgtcaacagcaaggtcaccgcc
aacctcgccgccgtcatagccgaggctggtataaaggaatgtgacaaatcagttggcaat
cttctctatgcagttgccactaagtacccaactaatgcacttgttcatcgtcctgtcctt
attaaatatgtcttgtcaacaaagataaagaaccctgcacaactagatggtgctctatca
tttctttctaatactggtcctgattctctggatgtcaagaagtttgaagaagcatgtggt
gtaggtgtggttgtttctattgaggagattaagtcaactgttactgatgtacttgaggag
aatatggaagctataaaggagcagcggtatcacataaatgttggtaccctatgtggacag
gttaggaagagacacccgtggggtgatgctaaggcaataaaggaggaaattgacaacagg
cttgcagaaatactaggcccgaagacagaagctgacaatataaaaccagtgaaaaagaag
aaggaaaaaccggcaaaagttgaggagaaaaaagatgcagttgccacttctgctccacca
tctgaggaggaattgaacccatatactatatttccccagccagaagagaactttaaggtt
catacagaaatatttttcagcagtggaaatatatggagagcacataacacaaaagaaatt
ttagaaaaacatctgaaggcaactggaggaaaagtgatgacccgtttcccaccagaacct
aatggatatctacatattggtcatgccaaggccatgtttattgattttgggctggcgaag
gagcgaaatggtcactgctaccttaggtttgatgacacaaatccagaagctgaaaagaaa
gagtatatagatcacattcaggaaattgtccattggatgggatgggagccctacaaagta
acatacacgagtgactatttccaagctttgtatgagcatgctattgagttaatacggaaa
gggctagcctatgtggaccaccagactgctgaagaaatcaaggagtatagggataagaag
atgaatagtccatggagggataggccaattgaagagtcactgaaattgtttgaagacatg
aggcgtgggttgattgctgagggcgcagcaactctccgaatgaagcaggacatgcagaat
gagaacaaaaatatgtctgacttaatagcatatagaataaaattcacccctcatccacat
gctggcgacaagtggtgtatctatccaagttatgactacgctcattgcatggtggattct
cttgaaaacatcacacattcgttgtgcacgcttgagtttgacatacgtcgcccttcatac
tactggctacttgttgccttgggcctctatcagccatatgtgtgggaatattcaaggcta
aacatatcaaatactgtgatgtctaaaagaaagttgaatcgacttgtgacagagaaatgg
gtagatgggtgggatgatccccgtttgttgacattggccggactccggcgacggggagta
tcatcaactgcgattaattcgtttatccgtggaattgggataacaagaagtgacaatagc
ttaattcgagttgaccgcctggaatatcacatcagggaagagcttaacaaaacagctccc
cgaacgatggttgttttgcgccctctaaaggttgtaataaccaacttggaagaaggaaaa
gtactggatctagatgggaaaatgtggcctgatgcttctgatactgatgcttcctcccac
tataaggttcctttctcaagaactgtctacattgagaaaactgattttcgcctaaaggac
tcgaaagattactatggtctagcccctggtaaatctgtcatgctaaggtatgcattcccc
ataaaatgcacagatgttatctatggtgatagtcctgatgatattgtcgaaattcgagct
gaatatgaccctttgaagacttctaaacttaagggtgttctgcactgggttgctgagccg
acacctggcgtcgaaccgttaaaggtggaagttagattgttcgagaagctgttcatgtca
gagaatcccgctgaattggaggattggctgggggatcttaacccgaactcaaaagaggtg
ataaaggatgcttatgctgtaccgtcacttgccactgcagttctgggtgacaagttccag
tttgagcgccttggctactttgctgtggataccgactccacgccggagaagcttgtgttc
aacagaacagttaccctccgtgattcgtttgggaagtctggacccaagtga
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