Panicum virgatum (switchgrass): 120706870
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Entry
120706870 CDS
T07260
Name
(RefSeq) poly [ADP-ribose] polymerase 2-like isoform X1
KO
K10798
poly [ADP-ribose] polymerase 2/3/4 [EC:
2.4.2.30
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120706870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvir03032
]
120706870
03036 Chromosome and associated proteins [BR:
pvir03036
]
120706870
03400 DNA repair and recombination proteins [BR:
pvir03400
]
120706870
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
120706870
DNA replication proteins [BR:
pvir03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
120706870
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
120706870
DNA repair and recombination proteins [BR:
pvir03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
120706870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
WGR
SAP
SAP_new25
Rho_N
Motif
Other DBs
NCBI-GeneID:
120706870
NCBI-ProteinID:
XP_039847545
LinkDB
All DBs
Position
5K:complement(20003770..20024740)
Genome browser
AA seq
659 aa
AA seq
DB search
MSARLRVEELRAELQRRGLDDSGNKTALVRRLDAAIRMEEKAAVAAAAADGDGVAADGVV
VDGEGNGGGEGSKKRKRTGDGEEEGNGDASLEAAKLEGMSYRELQALAKSRGLAANGSKK
DVIERLLSAPANATDDVQDEKRAPKGGVEKVEEGVKKEKMVAATKKGAAVLDQHIPNHIK
ANYHVLQLGDDIYDATLNQTNLGDNNNKFYIIQVLEPDAGGSFMVYNRWGRVGARGQDKL
HGPFSRDQAIYEFAEKFQNKTNNLWCDRKKFKCYAKKYAWIEMDYGETDKETNKAEKKGS
ITDQIKETKLETRIAQFISLICNISMMKQQMVEIGYNADKLPLGKLSKPTILKGYDVLKR
ISNVISRADRRQLEQLTGEFYTVIPHDFGFRKMREFIIDSPQKLKAKLEMVEALGEIEIA
TKLLEDDSSDQDDPLYARYKQLHCDFTPLEADSEEYSMIKAYLMNTHGKTHSGYTVDIVQ
IFKVSRDGETERFQKFASVGNRMLLWHGSRLSNWTGILSQGLRIAPPESPVTGYMFGKGV
YFADMFSKSANYCYASDSSRSGVLLLCEVALGDMNELLNADYDANDLPKGKLSTKGVGQT
APDLSESKTTNDGVVVPLGKPKQEPSKRGCLLYNEYIVYNVDQIRMRYVLHVSFNFKRR
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcaaggctgcgggtggaggagctccgcgccgagctgcagcgccgcggcctcgac
gactccggcaacaagacggcgctcgtgcggaggctggacgccgcaatccgcatggaggag
aaggctgcggtggctgctgcggcggcagatggggatggtgtggccgcagatggtgtggtc
gtggatggcgaagggaacggcgggggcgaaggcagcaagaagaggaaaaggaccggtgat
ggggaggaagaggggaacggcgatgcctctttggaggcggcaaagctagagggcatgagc
taccgcgagctgcaggcattggccaagtcacggggactcgcggcaaatggtagcaagaag
gatgttatcgagaggttgctgtcggcccctgctaatgccacagatgacgttcaggacgag
aagagagctccaaaaggtggtgttgagaaggttgaggagggggtgaaaaaggagaagatg
gttgcagccaccaagaagggtgctgcagtgctggaccagcacattcctaatcacataaaa
gcgaactatcatgtcttgcaactgggtgatgacatctatgatgcaaccttgaaccagact
aatcttggagataacaacaataagttctatatcatccaagttttagaacctgatgctggt
ggaagcttcatggtttacaatagatgggggagagtaggggcacgaggtcaagataaactg
catggtcccttttcacgagaccaagcaatatatgaatttgcggagaagtttcagaacaaa
actaataacctttggtgtgatcgcaagaaattcaaatgttatgcaaagaaatacgcttgg
attgaaatggactatggagaaactgataaggaaacaaataaggctgagaagaaaggttcc
attactgatcagataaaggagacaaaacttgaaactcggattgcacaattcatatccttg
atatgcaatattagcatgatgaagcagcaaatggtggaaataggttacaatgctgataaa
cttccccttggaaagctaagcaaacctacaatacttaagggttatgatgttctgaaaagg
atatccaatgttatttcaagggcagataggaggcagcttgagcaattgactggggaattc
tacaccgtgattcctcatgactttggtttcagaaagatgcgtgaatttattattgactct
cctcagaaactaaaagctaagctggaaatggttgaagcacttggtgagattgagattgca
accaagcttctggaggatgattcaagtgaccaggatgatccactatatgctcgatacaag
caacttcattgtgacttcacacctcttgaagctgattcagaagaatactctatgataaaa
gcatatttgatgaatacccatggcaaaacacactcgggttatactgtggacatagtgcaa
atatttaaggtgtccagagatggtgaaacagagcgatttcagaagtttgctagtgtagga
aataggatgcttctgtggcatggttcccgattgagcaactggactgggatcctttctcag
ggtttgcgaatcgctcctcctgaatcacctgtaactggttacatgtttggcaagggcgtt
tactttgccgatatgttttcgaagagcgcaaactattgctatgcgtcagattcatctaga
tctggagtactgcttctatgtgaggttgcattgggtgatatgaacgagctgctaaatgca
gattacgatgctaatgacttgcccaagggaaaactaagcacgaaaggagttggtcaaacg
gcacctgacttatcagagtctaagaccaccaatgatggtgtggttgttccccttgggaaa
cctaaacaggagccttccaaaaggggttgcttgctttacaatgagtacatagtgtataat
gtagatcagataagaatgcggtatgtcctccatgtctccttcaacttcaagagacggtag
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