Panicum virgatum (switchgrass): 120707091
Help
Entry
120707091 CDS
T07260
Name
(RefSeq) serine/threonine-protein kinase RIO1-like
KO
K07178
RIO kinase 1 [EC:
2.7.11.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120707091
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pvir01001
]
120707091
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvir03009
]
120707091
Enzymes [BR:
pvir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
120707091
Protein kinases [BR:
pvir01001
]
Serine/threonine kinases: Other
RIO family [OT]
120707091
Ribosome biogenesis [BR:
pvir03009
]
Eukaryotic type
Pre-40S particles
Kinases
120707091
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIO1
Pkinase_fungal
B3R
TCAD9
Motif
Other DBs
NCBI-GeneID:
120707091
NCBI-ProteinID:
XP_039847801
LinkDB
All DBs
Position
5K:complement(30752471..30759050)
Genome browser
AA seq
547 aa
AA seq
DB search
MAHDATSEPEEEWSDTDLDDASDTEVGDALDWLDAVEGPDGSARPFAAFSAAGGAGAARR
PNAHGGVLSRPLQPLSNRTQKLASHIRAAPLEEWEGRMNVGMSNSVTTAIRDSIRETTIG
KIRNTEKADRATVEQAIDPKTRMVLFKMLNRSVFNNINGCISTGKEANVYHATKVEGQEL
AIKVYKTSVLVFKDRDRYVQGDYRFRHGYCKHNPRKMVKTWAEKEMRNLLRVRAAGIRCP
KPLLLRLHVLVMEFIGRGGWAAPRLKDAALSDDKLRESYFEIITTMRTLYQKCKLVHGDL
SEYNILYFEGHLYIIDVSQSVDLDHPSALDFLKEDCLHVSDFFKKRGIAVMTVTDLFNFV
IDQNIADEDVDGYLDKVQQKIVENGGTDTNDEICPTVMVQTLDYVKQCEADLVNMSMMQR
SSFGYEPPADKLYDQPLLGFVRTKNAHAENQQKQLPQNTMEETLDLQNKCSLEDKVEDQE
DNSESCSSFDEDSSWEEAPKMGPEERKTARKENKKKVKEEKREARKTKIPKAEKKKRKKM
AKAKCKR
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcccacgacgccacgtccgagcctgaggaggagtggtcggacactgacctcgacgac
gcctcggacaccgaggtgggcgacgccctggactggctggacgccgtggagggccccgat
ggctcggcgcggcccttcgcggcgttctctgccgccggtggcgcgggcgcggcgcgcagg
cccaacgcgcacggcggcgtgctctcccgccccctccagccactctccaaccgcacccag
aagctcgcctcacacatccgtgcagcgcccttggaggagtgggaaggtaggatgaacgtg
gggatgtccaattcggtaactaccgctatcagggatagcataagggaaacaacaattggg
aagataaggaacacggagaaggctgaccgtgctacagtggaacaggctattgacccaaaa
acacgcatggttttgttcaagatgttaaatcgtagtgtttttaataacataaatggttgc
atctctacagggaaagaggcaaatgtctatcatgcaacaaaggtggagggtcaggagtta
gcaattaaagtctacaaaacctctgtccttgtttttaaggatcgcgaccggtatgttcaa
ggagattatcgttttaggcatggttactgcaagcataatccacggaaaatggttaagacc
tgggctgaaaaggaaatgagaaaccttctacgagtgagagcagctggaatcagatgccct
aaaccgttgctattgaggcttcatgtattggtgatggaattcatagggagaggaggttgg
gctgctcctcgtcttaaggatgctgctttgtcagatgacaagttgcgtgaaagttacttt
gagataattacaacaatgcggacactttaccaaaagtgcaagttggtccatggagatttg
agtgagtacaacattctttatttcgagggccacttgtacattattgatgtttcacaatct
gttgaccttgatcacccttcagcattggacttcttaaaggaagattgcttgcatgtttct
gacttctttaagaaacgaggcattgcagtcatgacggtaacagatttatttaattttgtt
attgaccaaaacattgctgatgaggatgttgatggttacctggataaggttcagcaaaag
atcgtggaaaacggtggtacagatacaaatgatgaaatttgtccaacagtcatggtgcaa
actttggattatgtgaagcaatgcgaggcagatttagtcaacatgtcaatgatgcaacgc
tcatcctttggttacgagccaccagcggataagctttatgaccaaccactattaggattt
gtacggacgaaaaatgcacacgctgaaaatcagcaaaaacaattgccacagaatacaatg
gaagaaaccttggatctgcaaaataagtgctcattggaggacaaagtggaagatcaagag
gacaatagtgaatcttgctcaagttttgatgaagacagttcgtgggaggaggctcccaaa
atgggacctgaggaaaggaagactgctcggaaagagaacaagaagaaggtgaaggaagag
aagagagaagctcgcaagacaaagatcccaaaggctgagaagaagaaaaggaagaaaatg
gcaaaagcaaagtgcaagcgttag
DBGET
integrated database retrieval system
