Panicum virgatum (switchgrass): 120707386
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Entry
120707386 CDS
T07260
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase 2-like isoform X1
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvir03016
]
120707386
Enzymes [BR:
pvir01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
120707386
Transfer RNA biogenesis [BR:
pvir03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
120707386
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Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-GeneID:
120707386
NCBI-ProteinID:
XP_039848210
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Position
5K:complement(38976043..38979532)
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AA seq
358 aa
AA seq
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MEAPVPWRVLEFYSGIGGMRYSLMASGARADVVEAFDINDVANDVYEHNFGHRPCQGNIQ
TLTASDLDKYKAHAWLLSPPCQPYTRQGLQKHSADARAFSFIKILNLMQNMSYPPQMLFV
ENVVGFEVSDTHDQLLEVLSSLNFNLQEFILSPLQFGVPYSRPRYFCLAKREPMRFQNAS
VNNKLLRTPMCLSQTVKCTSQDRDHQTEEEQDPVCKPVNDFLVMEADAGIQNQTILQDYI
VPLNLIERWGNAMDIVYPESKRCCCFTKSYYRYVKGTGSLLATSENLKWVPEEKLAISSL
KELGLRFFTPREVANFHSFPSSFCFPDHISLRQQYAMLGNSLSVAVVGPLLRYLFAEA
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgccggtaccatggagagtgctcgagttctacagcggcatcggcggcatgagg
tactcgcttatggcgtccggcgcgcgggcggatgtggtggaggccttcgacatcaacgac
gtcgcgaacgacgtctacgagcacaacttcggccaccgcccctgccaggggaacattcaa
acactcactgctagtgacctagacaaatacaaggcacatgcatggcttctttctcctcca
tgtcagccatacacacggcaagggcttcagaagcattcagctgatgcccgtgcattttcg
ttcatcaagattcttaacctcatgcagaacatgagctaccctccacaaatgttatttgtg
gaaaatgtagtcggatttgaggtgtctgatacacatgaccagttgctggaggtcctttca
agtctaaattttaacttacaagaattcatcctaagcccattacagtttggtgtcccatac
tctagacctcgctacttttgtttggcgaaacgagaacctatgcgatttcaaaatgcatca
gtcaacaataagttgctccggacacctatgtgcctaagccagacagtgaaatgtacatca
caggatagggaccaccaaactgaagaagagcaggatccagtatgtaaaccagtaaatgac
tttcttgtcatggaggctgatgcaggcattcaaaatcaaacaattttgcaagattacata
gtcccgctaaacttgattgagcggtgggggaatgctatggatattgtataccctgaatcc
aagcggtgctgttgtttcactaaaagctactatcgctatgtgaaggggacaggctccttg
ctggctacatctgaaaacctcaaatgggttcctgaagagaagcttgcaatttcttccctg
aaggagttaggcctacgatttttcacccctcgagaggtcgccaatttccattccttccct
tcaagcttctgcttcccggatcacataagccttaggcaacagtatgctatgttgggcaac
agtctgagtgtagcagttgtgggtcctttgctgcgttatctgtttgctgaggcatag
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