Panicum virgatum (switchgrass): 120708338
Help
Entry
120708338 CDS
T07260
Name
(RefSeq) 40S ribosomal protein S11-like isoform X1
KO
K02949
small subunit ribosomal protein S11e
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
120708338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pvir03011
]
120708338
Ribosome [BR:
pvir03011
]
Ribosomal proteins
Eukaryotes
Small subunit
120708338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S17_N
Ribosomal_S17
DUF4443
Motif
Other DBs
NCBI-GeneID:
120708338
NCBI-ProteinID:
XP_039849484
LinkDB
All DBs
Position
1K:complement(40864660..40867069)
Genome browser
AA seq
172 aa
AA seq
DB search
MAEQTEKAFLKQPKVFLCPKKATKGNKPGKGGNRFWKNIGLGFKTPREAIEGTYIDKKCP
FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE
GDHVIIGQCRSSQYLCAMQTTVQDREVQCAEGDPCWVQEWCSKEGIHCCLRF
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcagactgagaaggctttcctcaagcagcctaaggtgttcctctgcccgaag
aaggccaccaaggggaacaagcctggcaagggcggcaacaggttctggaagaacattggc
cttggtttcaagactcccagagaagccattgaaggaacctacattgataagaaatgcccg
ttcaccggcactgtgtcaattagaggtcgcatcattgcgggaacatgccatagtgctaaa
atgaacaggactatcattgttcgtaggaactaccttcacttcgtcaagaaataccagagg
tatgagaagaggcactctaacatccctgcccacatttccccctgcttccgtgtgaaggaa
ggagaccacgtgatcattggccagtgcagatcttctcaatacctttgtgccatgcagacc
actgtccaagaccgtgaggttcaatgtgctgaaggtgatccctgctgggtccaagagtgg
tgcagtaaagaaggcattcactgctgcctgagattctga
DBGET
integrated database retrieval system
