Panicum virgatum (switchgrass): 120709010
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Entry
120709010 CDS
T07260
Name
(RefSeq) very-long-chain aldehyde decarbonylase GL1-4-like
KO
K15404
aldehyde decarbonylase [EC:
4.1.99.5
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00073
Cutin, suberine and wax biosynthesis
pvir01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00073 Cutin, suberine and wax biosynthesis
120709010
Enzymes [BR:
pvir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.5 aldehyde oxygenase (deformylating)
120709010
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GFIT
Motif
Pfam:
CER1-like_C
FA_hydroxylase
Motif
Other DBs
NCBI-GeneID:
120709010
NCBI-ProteinID:
XP_039850448
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Position
1K:complement(41916006..41922340)
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AA seq
619 aa
AA seq
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MATRPGPLTEWPWQRLGNFKYVVMAPVVVHGARRVAGGGWGDIDLAFALILPSLLLRMAH
NQIWISAARYQTARSKHRIVDRGIEFDQVDRERGWDDQIILNGLFFYVGYLLIPSARHLP
AWRADGAAAMALLHAGPVEFLYYWFHRALHHHFLYSRYHSHHHSSIVTEPITSVIHPFAE
HMVYYFLFAIPMLTTVYMGNASVLGFVLYIAYIDFMNNMGHCNFELVPKWVFQLFPPLKY
LMYTPSFHSLHHTQFRTNYSLFMPFYDYIYNTMDKSSDQLYQSSLRGTEETPDLVHLTHM
TDLQSAYHLRIGFASIASKPSNRSMWYMWTLWPLAWLSMVFAWVYGSSAFVVERIKLKKL
TMQTWAIPRYNFQYGLNWERESINDLIEKAILDADARGVKVLSLGLLNQAKQLNGGGELF
RQKYPKLRVRLVDGSGLATAVVLKSIPHDAKQVFLQAGPSKIACATASALCEKGVKVIMN
PKKEYDMLKSQIADSRASYLKNSSNHMPQIWLVDSIDDKEQKMAPQGTIFIPISQFPIKK
IRKDCTYLSTPAMKIPETMQNIHACENWLPRKVMSAWRIAGILHALEGWTMHECGDAMMD
AEKAWSAAISHGFVPLTKA
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaggccgggccctttgactgagtggccatggcagaggctcggcaacttcaag
tacgtggtgatggctcccgtggtggtccacggcgcccggcgggtggccggcggcggctgg
ggcgacatcgacctcgccttcgcgctcatcctgccgtcgctgctgctgcggatggcccac
aaccagatctggatcagcgccgcccgctaccagacggcgcgcagcaagcaccgcatcgtc
gaccgcggcatcgagttcgaccaggtcgaccgcgagcgcggctgggacgaccagatcatc
ctcaacgggctcttcttctacgtgggctacctgctcatcccgagcgcgaggcacctgccg
gcgtggagggccgacggcgccgcggcgatggcgctgctgcacgccgggcccgtggagttc
ctctactactggttccaccgcgcgctgcaccaccacttcctctactcgcgctaccactcg
caccaccactcctccatcgtcaccgagccaatcacatcggtgatccatccctttgctgag
cacatggtctactacttcctgtttgcgatccccatgctgacgacggtttacatggggaac
gcctccgtcctgggctttgtcctctacatcgcctacatcgacttcatgaacaacatgggg
cactgcaacttcgagctggtgcccaagtgggtgttccagctcttccctcccctcaagtac
ctcatgtacacgccgtcgtttcattccctgcaccacacgcagttccgcacgaactactcg
ctattcatgccgttctacgactacatttacaacaccatggacaagtcatccgaccagctg
tatcagagctcgctcagggggacagaggaaacgccggaccttgttcatctcacgcacatg
accgacttgcagtcggcctaccatttacggatcggattcgcctccatcgcgtccaaacca
tctaacaggtctatgtggtacatgtggacgctgtggcccttggcatggctgtcaatggtg
tttgcgtgggtttatgggtcctctgcgtttgtggttgagaggatcaagctaaagaagctg
acgatgcaaacatgggccataccaagatacaactttcaatatggcctgaactgggagaga
gaatcgatcaacgacttgattgaaaaggcaatactagatgctgatgcaagaggcgttaaa
gttctcagcctaggattattaaatcaggcgaagcaactcaatggtggtggtgaattattc
agacaaaagtatccgaaattaagagttcgccttgtggacggaagtggcttagcaaccgca
gtggtgctcaaaagcattcctcatgacgcaaagcaagtttttcttcaggcaggcccttct
aagatagcctgtgccacagcttctgcattgtgtgagaaaggcgtgaaggtaatcatgaat
ccaaagaaggaatatgatatgcttaagtcacagattgcagatagcagagcaagctatttg
aaaaactccagcaaccacatgcctcagatttggctagtggacagcattgatgacaaagaa
cagaagatggcaccacaaggaactatattcatccctatctcacagttccccatcaaaaaa
attcgcaaggattgcacttacttgagcaccccagcaatgaaaatcccagaaaccatgcag
aatatccatgcctgcgagaattggctgccaagaaaggtgatgagtgcttggcgcatcgct
ggaatacttcacgccctggaaggatggaccatgcacgagtgtggggatgccatgatggac
gctgagaaagcatggtcagctgctataagccacgggttcgttcctctgactaaagcttga
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