Panicum virgatum (switchgrass): 120709319
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Entry
120709319 CDS
T07260
Name
(RefSeq) phenylalanine ammonia-lyase-like
KO
K13064
phenylalanine/tyrosine ammonia-lyase [EC:
4.3.1.25
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00360
Phenylalanine metabolism
pvir00940
Phenylpropanoid biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Module
pvir_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09105 Amino acid metabolism
00360 Phenylalanine metabolism
120709319
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
120709319
Enzymes [BR:
pvir01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.25 phenylalanine/tyrosine ammonia-lyase
120709319
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GFIT
Motif
Pfam:
Lyase_aromatic
VAD1-2
Motif
Other DBs
NCBI-GeneID:
120709319
NCBI-ProteinID:
XP_039850865
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Position
1K:complement(42299260..42302913)
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AA seq
701 aa
AA seq
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MAGNGLIVENDPLNWGAAAAELAGSHLDEVKRMVAQAREPVVKIEGSTLRVGQVAAVAAA
RDASGVAVELDEAARPRVKASSEWILDCIAHGGDIYGVTTGFGGTSHRRTKDGPALQVEL
LRHLNAGIFGTGRDGHTLPSEVVRAAMLVRINTLLQGYSGIRFEILEALAKLLNTGVSPC
LPLRGTITASGDLVPLSYIAGLITGRPNARAVTADGRQVDAAEAFKVAGIEGGFFRLNPK
EGLAIVNGTSVGSALAATVLYDANVLAVLSEVLSAVFCEVMNGKPEYTDHLTHKLKHHPG
SIEAAAIMEHILEGSSFMKHAHKVNELDPLLKPKQDRYALRTSPQWLGPQIEVIRAATKS
IEREVNSVNDNPVIDVHRGKALHGGNFQGTPIGVSMDNARLAIANIGKLMFAQFSELVNE
FYNNGLTSNLAGSRNPSLDYGFKGTEIAMASYCSELQYLGNPITNHVQSAEQHNQDVNSL
GLVSARKTAEAVDILKLMSSTYIVALCQAVDLRHLEENIKTSVKNTVTQVAKKVLTMDPT
GDLSAARFSEKDLLTAIDREAVFTYAEDAASASLPLMQKLRAVLVDHALSSGDAEREPSV
FSKITKFEEELRAVLPREVEAARVAVAEGAAPLPNRIKDSRSFPLYRFVREELGCVFLTG
EKLKSPGEECNKVFVGISEGKLVDPMLECLKEWDGKPLPIN
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcaacgggctgatcgtggagaacgacccgctcaactggggcgcggcggcggcg
gagctggccgggagccacctggacgaggtgaagcggatggtggcgcaggcgcgggagccc
gtggtcaagatcgagggctccaccctccgcgtcggccaggtggccgccgtcgccgccgcc
cgggacgcgtccggcgtcgccgtcgagctcgacgaggccgcccgcccccgcgtcaaggcc
agcagcgagtggatcctcgactgcatcgcccacggcggcgacatctacggcgtcaccacc
ggcttcggcggcacctcgcaccgccgcaccaaggacgggcccgcgctccaggtcgagctg
ctcaggcatctcaacgccggcatcttcggcaccggccgcgacggccacacgctgccgtcg
gaggtggtccgcgcggcgatgctggtgcgcatcaacaccctcctgcagggctactcgggc
atccgcttcgagatcctcgaggccctcgccaagctgctcaacaccggcgtcagcccgtgc
ctgccgctccggggcaccatcaccgcctcgggcgacctcgtgccgctctcctacatcgcc
ggcctcatcacgggccgccccaacgcgcgggccgtcaccgccgacggcaggcaggtggac
gccgccgaggccttcaaggtcgccggcatcgagggcggcttcttccggctcaaccccaag
gagggcctcgccatcgtcaacggcacctccgtcggctccgcgctcgccgccaccgtgctc
tacgacgccaacgtcctcgccgtcctctccgaggtcctctccgccgtcttctgcgaggtc
atgaacggcaagcccgagtacaccgaccacctcacccacaagctcaagcaccacccgggc
tccatcgaggccgccgctatcatggagcacatcctcgagggcagctccttcatgaagcac
gcccacaaggtgaacgagctggacccgctgctcaagcccaagcaggaccggtacgcgctc
cgcacctcgccgcagtggctcggcccgcagatcgaggtcatccgcgccgccaccaagtcc
atcgagcgcgaggtcaactcggtcaacgacaacccggtcatcgacgtccaccgcggcaag
gcgctccacggcggcaacttccagggcacccccatcggcgtgtccatggacaacgcccgc
ctcgccatcgccaacatcggcaagctcatgttcgcgcagttctcggagctggtcaacgag
ttctacaacaacggcctcacctccaacctggccggcagccgcaaccccagcctggactac
ggcttcaagggcaccgagatcgccatggcctcctactgctccgagctccagtacctgggc
aaccccatcaccaaccacgtccagagcgcggagcagcacaaccaggacgtcaactccctc
ggcctcgtctccgccaggaagaccgccgaggccgtcgacatcctcaagctcatgtcctcc
acctacatcgtcgcgctctgccaggccgtcgacctgcgccacctcgaggagaacatcaag
acctccgtcaagaacaccgtcacccaggtcgccaagaaggtgctcaccatggaccccacc
ggcgatctctccgccgcgcgcttcagcgagaaggacctcctcaccgccatcgaccgcgag
gccgtcttcacctacgccgaggacgccgccagcgccagcctcccgctcatgcagaagctg
cgcgccgtgctggtggaccacgccctcagcagcggcgacgccgagcgcgagccctcggtg
ttctccaagatcaccaagttcgaggaggagctgcgcgccgtgctgccacgggaggtggag
gccgcccgcgtagccgtcgccgagggcgccgcgcccctgcccaaccggatcaaggacagc
aggtccttcccgctctaccgcttcgtccgcgaggagctcggctgcgtgttcctcaccggc
gagaagctcaagtcccccggcgaggagtgcaacaaggtcttcgtcggcatcagcgagggc
aagctcgtcgaccccatgctcgagtgcctcaaggagtgggacggcaagcccctgcccatc
aactaa
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