Panicum virgatum (switchgrass): 120712589
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Entry
120712589 CDS
T07260
Name
(RefSeq) glutamate decarboxylase-like
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00250
Alanine, aspartate and glutamate metabolism
pvir00410
beta-Alanine metabolism
pvir00430
Taurine and hypotaurine metabolism
pvir00650
Butanoate metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Module
pvir_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
120712589
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
120712589
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
120712589
00430 Taurine and hypotaurine metabolism
120712589
Enzymes [BR:
pvir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
120712589
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Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
120712589
NCBI-ProteinID:
XP_039854354
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Position
6K:complement(39581751..39585285)
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AA seq
499 aa
AA seq
DB search
MALSHASSIARDDAVACTFASRYVRERLPRYRMPERSIPREAAYQIINDELMLDGNPRLN
LASFVTTWMEPECDKLIMGSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPIKEDETAV
GVGTVGSSEAIMLAGLAFKRKWQNKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELK
EVKLSEGYYVMDPVKAVDMVDENTICVAAILGSTLTGEFEDVKQLNDLLTEKNKETGWDV
PIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGVGWVIWRSKKDLPEE
LIFHINYLGTDQPTFTLNFSKGSSQIIAQYYQLIRLGFQGYKNIMENCMENAAILREGIA
ATGRFDILSKDAGVPLVAFSLKDSSRFSVFDISENLRRFGWIVPAYTMPADAEHVAVLRV
VIREDFSRTLLERLVGDVLKILRELDACATHAVRVATATAAGQSGDGGGVVARKSILEIE
REVASRWRDAVSKKKTGPC
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggcgctctcgcacgcgagctccatcgcccgggacgacgccgtcgcctgcaccttcgcg
tcgcgctacgtgcgcgagcgcctgccgcggtaccggatgccggagcggtcgatcccgcgg
gaggcggcgtaccagatcatcaacgacgagctgatgctggacggcaacccgcggctgaac
ctggcgtccttcgtcaccacctggatggagcccgagtgcgacaagctcatcatgggctcc
atcaacaagaactacgtcgacatggacgagtaccccgtcaccaccgagctccagaaccgt
tgcgtaaatatgatagctcacctgttcaacgcgccgattaaggaggatgagactgctgtc
ggagttggaacagtgggatcctcggaagcaattatgcttgcaggcctagcattcaagagg
aaatggcaaaacaagaggaaggaacaggggaagccgtatgacaaacccaacattgtcacc
ggtgctaatgttcaggtttgctgggagaagtttgcaagatattttgaagtggagctaaag
gaggttaagttatctgaaggatattatgtcatggaccctgtcaaggctgttgacatggtg
gatgagaacaccatatgtgttgcggctatcttgggatctactctcacaggagagtttgaa
gatgtcaagcaattgaatgaccttcttactgaaaagaacaaggaaactgggtgggatgtg
ccgattcatgttgacgctgcgagcggagggttcatagcgcctttcctgtaccctgagctt
gaatgggacttcaggctaccactagtgaagagcatcaatgtcagtgggcacaagtatggc
cttgtctacgctggtgttggttgggtaatttggaggagcaagaaggatttgcctgaagag
ctcattttccatataaactacctggggacagaccagcctacgttcacgctcaacttctcc
aaaggttctagtcagatcattgcacaatactatcagctcattcgccttggcttccagggg
tacaagaacatcatggagaactgcatggagaacgctgcgatcctgcgggagggcatcgcg
gcgaccggccggttcgacatcctgtccaaggacgccggcgtgccgctggtcgccttctcg
ctcaaggacagcagccggttcagcgtgttcgacatctcggagaacctgcggcggttcggg
tggatcgtgccggcgtacaccatgccggcggacgcggagcacgtggccgtgctccgcgtg
gtcatccgggaggacttcagccggaccctcttggagcggctcgtcggcgacgtcctcaag
atcctgcgcgagctggacgcctgcgccacccacgccgtgcgggtcgccaccgccaccgcc
gcggggcagtcgggcgacggcggcggcgtcgtggccaggaagagcatcctggagatcgag
cgggaggtcgcctcgcgctggagggacgccgtgagcaagaagaagaccgggccgtgctga
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