Panicum virgatum (switchgrass): 120712999
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Entry
120712999 CDS
T07260
Name
(RefSeq) adenosylhomocysteinase-like
KO
K01251
adenosylhomocysteinase [EC:
3.13.2.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00270
Cysteine and methionine metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
120712999
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pvir01009
]
120712999
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120712999
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.13 Acting on carbon-sulfur bonds
3.13.2 Thioether and trialkylsulfonium hydrolases
3.13.2.1 adenosylhomocysteinase
120712999
Protein phosphatases and associated proteins [BR:
pvir01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120712999
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120712999
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Gene cluster
GFIT
Motif
Pfam:
AdoHcyase
AdoHcyase_NAD
2-Hacid_dh_C
IlvN
TrkA_N
THF_DHG_CYH_C
NAD_binding_7
F420_oxidored
ELFV_dehydrog
Shikimate_DH
3HCDH_N
XdhC_C
Motif
Other DBs
NCBI-GeneID:
120712999
NCBI-ProteinID:
XP_039854892
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Position
1K:46739492..46742245
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AA seq
485 aa
AA seq
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MSLSVEKTSSGREYKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSKPFAGARISGS
LHMTIQTAVLIETLTTLGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLEEYWWC
TERCLDWGEGGGPDLIVDDGGDATLLIHEGVKAEEEYEKTGKVPDPESTDNAEFKIVLTI
IRDGLKSDPKKYRKMKERLVGVSEETTTGVKRLYQMQETGTLLFPAINVNDSVTKSKFDN
LYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ
ALMEGLQVLTLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGL
ETYPGVKRITIKPQTDRWVFPEIKTGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ
LELWKEKSSGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLTKSQADYISVPIEGPYKP
AHYRY
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctctccgtggagaagacctcgtcggggcgggagtacaaggtcaaggacctgtcc
caggccgacttcggccgcctcgagatcgagctggccgaggtcgagatgcccgggctcatg
gcctgccgcgccgagttcggcccgtccaagcccttcgccggcgcaaggatctccggctcc
ctccacatgaccatccagaccgccgtcctcatcgagaccctcaccacgctcggcgccgag
gtccgctggtgctcctgcaacatcttctccacgcaggaccacgccgccgccgccatcgcg
cgggactccgccgcggtcttcgcctggaagggggagacgctcgaggagtactggtggtgc
accgagcgctgcctcgactggggcgagggcggcggccccgacctcatcgtcgacgacggt
ggcgacgccacgctcctcatccacgagggcgtcaaggccgaggaggagtacgagaagacc
ggcaaagtcccagacccggagtccaccgacaacgccgagttcaagatcgtgctcaccatc
atccgcgacgggctgaagtctgaccccaagaagtaccgcaagatgaaggagaggctcgtt
ggagtctcggaggagaccactaccggagtcaagaggctctaccagatgcaggagaccggc
actctactcttccccgccatcaacgttaatgactccgtcaccaagagcaagtttgacaac
ctgtatggttgccgccactccctccctgatggtctgatgagggccaccgatgttatgatt
gctggcaaggttgcggtagtgtgcggttatggtgatgttggcaagggctgtgctgctgcc
ctcaagcaggctggtgcccgtgtcatcgtcactgagattgaccccatctgtgcccttcag
gccctgatggagggtcttcaagtacttaccttggaggatgtcgtttctgaagctgacatc
tttgtgaccaccaccggcaacaaggacatcatcatggttgaccacatgaggaagatgaag
aacaatgcaattgtctgcaacatcggccactttgacaatgagatcgacatgctcggtctt
gagacctaccctggtgtgaagcgtatcaccatcaagcctcagacagaccgctgggtgttc
cctgagattaagactggcatcattgtcctcgctgagggtcgtctgatgaaccttggatgc
gctactggtcaccccagctttgtcatgtcctgctcattcactaaccaggtcattgctcag
cttgagctttggaaggagaagagctctggtaagtatgagaagaaggtgtacgtgctcccc
aagcaccttgatgagaaggttgctgctctccacttgggcaagcttggtgccaaactcacc
aagctcaccaagtctcaggctgactacatcagcgtcccgatcgagggtccctacaagccc
gcgcactaccggtactag
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