Panicum virgatum (switchgrass): 120713773
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Entry
120713773 CDS
T07260
Name
(RefSeq) acetylornithine deacetylase-like
KO
K01438
acetylornithine deacetylase [EC:
3.5.1.16
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00220
Arginine biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01210
2-Oxocarboxylic acid metabolism
pvir01230
Biosynthesis of amino acids
Module
pvir_M00028
Ornithine biosynthesis, glutamate => ornithine
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09105 Amino acid metabolism
00220 Arginine biosynthesis
120713773
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.16 acetylornithine deacetylase
120713773
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Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-GeneID:
120713773
NCBI-ProteinID:
XP_039855680
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All DBs
Position
1K:47344520..47348460
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AA seq
444 aa
AA seq
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MASPALKDAVGGLDRDGFVALLSKLIGESARLQNDPPVHRPEEDLVAQHVVDALRPVSTE
TGGGPLVVRKVSYAEGRSNVIVEYPGTVPGRIVSFVGMHMDVVPANPSEWDFDPFSLTFD
SEDKDKLRGRGTTDCLGHVALVAQLMRRLGEVKPPLKHSVIGVFIANEENSSVTGIGVDG
LVKDGLLDMLKTGPLFWIDTADKQPCIGTGGMIPWHLKATGKLFHSGLAHKAINSMEMNM
EALKEIQKRFYTDFPPHEQEKVYKFATPSTMKPTKWSYPGGGLNQIPGECTISGDIRLTP
FYSTSHVVEKLKEYVEDINERLETTLDTRGPVSKYVLPDENLRGRLEISFDGDVMNGVAC
NLKSRGFKALCKATEEIVGHVEPYSITGSLPLIRELQDEGFDVQTAGYGLLKTYHAKNEY
CLFSDMAQGFQVFASIISQLEEEV
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggcatctccggcgctcaaggacgccgtgggcggcctcgaccgcgacggcttcgtcgcc
ctcctgtccaagctcatcggcgagtccgcgcgcctgcagaacgacccgccggtccacagg
ccggaggaggacctcgtggcgcagcacgtcgtcgacgcgctccgcccggtgtccaccgag
actgggggcggcccgctcgtcgtgcggaaggtcagctacgccgagggcaggagcaacgtc
atcgtcgagtacccaggcaccgtccccggccggatcgtctccttcgtcggcatgcacatg
gacgtcgtcccggccaaccccagcgagtgggacttcgatcctttctcactaacctttgat
agcgaagacaaggataagcttcggggacgtgggacaactgactgtctcggccatgttgcg
ctggtggctcagctaatgcggcggcttggtgaggtcaagccacccttgaagcattctgtc
attggtgtgttcattgcaaatgaggagaactcatctgtcactggcattggtgtcgatggc
cttgtgaaggatggcttgcttgacatgctcaagactggacccttgttctggatagacaca
gctgataagcaaccatgcattggcaccggtggaatgattccatggcacctcaaagcaaca
gggaagctgttccacagtggtcttgcacataaggccataaattcgatggagatgaacatg
gaagcactaaaagaaatccaaaaaaggttttatactgacttccctccacatgaacaagag
aaagtctataagtttgctactccatcgacaatgaagccaactaaatggagctatcctggt
ggagggcttaatcaaattcccggagaatgtacaatttcaggagatataaggttgactcct
ttctatagcacttcccatgtcgtggagaagttgaaggaatatgtagaggacataaatgag
agactcgagacaactcttgatacccgtggtcccgtgtccaaatatgttcttcctgatgaa
aatctgcgaggaaggcttgaaatcagttttgatggagatgtgatgaatggggtggcctgc
aatctgaagtctcgaggctttaaagcattatgcaaagcaactgaggaaattgttggccat
gttgaaccatattccatcaccgggagtctacctctgattagggaattacaggacgaagga
tttgatgttcaaacagctggatacggcttactgaagacgtatcacgccaagaacgagtac
tgcttgttttcagacatggcccaaggctttcaggtatttgcgagcatcatttcgcagctg
gaagaagaggtctga
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