Prionailurus viverrinus (fishing cat): 125147004
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Entry
125147004 CDS
T09889
Symbol
CLP1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125147004 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pviv03019
]
125147004 (CLP1)
Enzymes [BR:
pviv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
125147004 (CLP1)
Messenger RNA biogenesis [BR:
pviv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
125147004 (CLP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
ATP_bind_1
MMR_HSR1
AAA_18
TniB
AAA_16
AAA_22
nSTAND3
CbiA
Motif
Other DBs
NCBI-GeneID:
125147004
NCBI-ProteinID:
XP_047679917
LinkDB
All DBs
Position
D1:102953998..102957060
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AA seq
425 aa
AA seq
DB search
MGEEASDDKKPTTKFELERETELRFEVEASQSVQLELLAGMAEIFGTELTRNKKFTFDAG
AKVAVFTWHGCSLQLSGRTEVAYVSKDTPMLLYLNTHTALEQMRRQAEKEEERGPRVMVV
GPTDVGKSTVCRLLLNYAVRLGRRPTYVELDVGQGSVSIPGTMGALYIERPADVEEGFSI
QAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYQ
ALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDER
IREYFYGFRGCFYPHAFNVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRD
MVHHLLSVSTAEGTEENLSETSVAGFIVVTSVDLEHQVFTVLSPAPRPLPKNFLLIMDIR
FMDLK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgggagaggaggccagtgatgacaagaagccaacaactaaatttgaactagagcgagaa
acagaacttcgctttgaggtggaggcatctcagtcagttcagttggagctgctggctggg
atggcagaaatcttcggcacagagctgacccgaaacaagaaattcacttttgatgccggt
gccaaggtggctgttttcacttggcatggctgttctttacagctgagtggccgcaccgag
gtggcttatgtctccaaggacactcctatgttactttatctcaacactcacacagccttg
gagcagatgaggaggcaggcggagaaggaagaagagcgaggcccccgggtgatggtagtg
ggccccactgatgtgggcaagtccacagtgtgccgtctactgctcaactacgcagtgcgt
ttgggccgccgtcctacttacgtggagctggatgtgggtcagggctctgtttccatccct
ggtaccatgggggccctctacattgagcggccggcagatgttgaagagggattctctatc
caggcccctctggtgtatcattttggctccaccactcctggcaccaacatcaagctttat
aataagattacttctcgtttagcggatgtgttcaatcaaagatgtgaagtgaaccgaagg
gcctctgtgagtggctgtgtcattaatacctgtggctgggtcaagggctctggttaccag
gccctggtgcacgctgcctcagcctttgaggtagatgtggttgtggttctggatcaagaa
cgactgtacaacgaactaaaacgggacctgcctcactttgtacgcactgtgctgctccct
aaatccgggggtgtggttgaacgctccaaagacttccggcgggaatgtagggatgagcgt
atccgtgagtatttctatggattccggggctgtttctatccccatgccttcaatgtcaaa
ttttcagatgtgaaaatctacaaagttggggcacccaccattccagactcctgtttgcct
ttgggcatgtctcaggaggacaatcagctcaagctagtacctgtcacgcctggccgcgat
atggtgcaccacctcctgagtgttagcactgctgagggcacagaggagaacctttctgag
acaagtgtcgctggcttcatcgtggtgaccagcgtggacctggagcatcaggtgtttact
gttctctctccagccccccgcccactgcctaagaacttccttctcatcatggatatcagg
ttcatggatcttaagtag
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integrated database retrieval system
