Prionailurus viverrinus (fishing cat): 125150105
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Entry
125150105 CDS
T09889
Symbol
GRIN1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv04014
Ras signaling pathway
pviv04015
Rap1 signaling pathway
pviv04020
Calcium signaling pathway
pviv04024
cAMP signaling pathway
pviv04080
Neuroactive ligand-receptor interaction
pviv04713
Circadian entrainment
pviv04720
Long-term potentiation
pviv04724
Glutamatergic synapse
pviv05010
Alzheimer disease
pviv05014
Amyotrophic lateral sclerosis
pviv05016
Huntington disease
pviv05017
Spinocerebellar ataxia
pviv05020
Prion disease
pviv05022
Pathways of neurodegeneration - multiple diseases
pviv05030
Cocaine addiction
pviv05031
Amphetamine addiction
pviv05033
Nicotine addiction
pviv05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
125150105 (GRIN1)
04015 Rap1 signaling pathway
125150105 (GRIN1)
04020 Calcium signaling pathway
125150105 (GRIN1)
04024 cAMP signaling pathway
125150105 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125150105 (GRIN1)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
125150105 (GRIN1)
04720 Long-term potentiation
125150105 (GRIN1)
09159 Environmental adaptation
04713 Circadian entrainment
125150105 (GRIN1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
125150105 (GRIN1)
05014 Amyotrophic lateral sclerosis
125150105 (GRIN1)
05016 Huntington disease
125150105 (GRIN1)
05017 Spinocerebellar ataxia
125150105 (GRIN1)
05020 Prion disease
125150105 (GRIN1)
05022 Pathways of neurodegeneration - multiple diseases
125150105 (GRIN1)
09165 Substance dependence
05030 Cocaine addiction
125150105 (GRIN1)
05031 Amphetamine addiction
125150105 (GRIN1)
05033 Nicotine addiction
125150105 (GRIN1)
05034 Alcoholism
125150105 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pviv04040
]
125150105 (GRIN1)
Ion channels [BR:
pviv04040
]
Ligand-gated channels
Glutamate (ionotropic)
125150105 (GRIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
DUF6724
Motif
Other DBs
NCBI-GeneID:
125150105
NCBI-ProteinID:
XP_047685420
LinkDB
All DBs
Position
D4:94109977..94132720
Genome browser
AA seq
938 aa
AA seq
DB search
MSTMRLLTLALLFSCSFARAACDPKIVNIGAVLSTRKHEQMFREAVNQANKRHGSWKIQL
NATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPTPNDHFTPTPVSYTAGFYRIPVLG
LTTRMSIYSDKSIHLSFLRTVPPYSHQSSVWFEMMRVYSWNHIILLVSDDHEGRAAQKRL
ETLLEERESKAEKVLQFDPGTKNVTALLMEARELEARVIILSASEDDAATVYRAAAMLNM
TGSGYVWLVGEREISGNALRYAPDGIIGLQLINGKNESAHISDAVGVVAQAVHELLEKEN
ITDPPRGCVGNTNIWKTGPLFKRVLMSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRK
LVQVGIYNGTHVIPNDRKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTC
KEEFTVNGDPVKKVICTGPNDTSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVA
DGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTI
LVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDA
LTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRP
EERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQA
VRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILKSH
ENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRH
KDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPDPKKKATFRAITSTLASSFKRRRSSKDT
STGGGRGALQNQKDTVLPRRAIEREEGQLQMCARHRES
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatgcgcctgctgacactcgccctgcttttctcctgctcctttgcccgtgcc
gcctgcgaccccaagattgtcaacatcggagccgtgctgagcacgcgaaagcatgagcag
atgttccgtgaggccgtgaaccaggccaataagcggcatggctcctggaagattcagctc
aacgccacctcggtcacccacaagcccaacgccatccagatggccctgtcggtgtgcgag
gacctcatctccagccaggtctacgccatcctagttagccacccacctacccccaacgac
cacttcactcccacccccgtctcctacacagccggcttctaccgcatccccgtcctgggg
ctgaccacccgtatgtccatctactcagacaagagcatacacctgagcttccttcgcacg
gtgccgccctactcccaccagtcgagcgtctggttcgagatgatgcgcgtctacagctgg
aaccacatcatcctcctggtcagcgacgaccacgagggcagggccgcccagaagcgcctg
gagacgctgctggaggagcgcgagtccaaggctgagaaggtgctgcagttcgacccgggg
accaagaacgtgacggcgctgctgatggaggcacgggagctggaggcccgggtcatcatc
ctctctgccagcgaggacgacgccgccaccgtgtaccgcgcggccgcgatgctgaacatg
acaggctccgggtatgtgtggctggtgggggagcgagagatctcggggaacgccctgcgc
tacgccccggacggcatcatcggactgcagctcatcaatggcaagaacgagtcggcccac
atcagtgacgccgtcggtgtggtggcccaggcggtgcacgaactcctggagaaggagaac
atcaccgacccaccgcggggctgcgtgggcaacaccaacatctggaagacagggccgctc
ttcaagagggtgctgatgtcctccaagtacgccgacggggtgacgggccgtgtggagttc
aacgaggacggggaccggaagttcgccaactacagcatcatgaacctgcagaaccgcaag
ctggtgcaagtgggcatctacaacggcacccacgttatccccaacgacaggaagatcatc
tggccaggtggagagacagagaagccccgagggtaccagatgtccaccaggctgaagatt
gtgacgatccaccaagagcctttcgtgtacgtcaaacccacgctgagcgatggcacatgc
aaggaggagttcacggtcaatggggacccggtgaagaaggtgatctgcacaggacccaat
gacacgtcaccgggcagcccacgccacacagtgcctcagtgctgctatggcttctgcatt
gacctgctcatcaagttggcgcggaccatgaacttcacttatgaggtgcacctggtggcc
gatggcaagtttggcactcaagagcgggtgaacaacagcaataagaaggagtggaacggg
atgatgggcgagttgctcagcgggcaggcggacatgatcgtggcgcccctgaccatcaac
aacgagcgcgcacagtacatcgagttctccaagcccttcaagtaccagggcctgaccatt
ctggtcaagaaggagatcccccgaagcacgctggactcgttcatgcagcccttccagagc
acactgtggctgctggtggggctctcggtgcacgtggtggcggtgatgttgtacctgctg
gaccgcttcagccccttcggccggttcaaggtgaacagtgaagaggaggaggaggacgcg
ctgaccctgtcttcggccatgtggttctcctggggcgtcctgctcaactcgggtatcggg
gaaggcgccccccgaagcttctcagcgcgcatcctgggcatggtgtgggccggcttcgcc
atgatcatcgtggcctcctacaccgccaacctggcggccttcctggtgctggaccggccc
gaggagcgcatcaccggcatcaacgacccgcggctgaggaatccctcggacaagttcatc
tacgcgactgtgaagcagagctcggtggacatctacttccggcggcaggtggagctgagc
accatgtaccgacacatggagaagcacaactatgagagcgcggccgaggccatccaagcc
gtgcgggacaacaagcttcatgccttcatctgggactcggcggtgctggagtttgaggcc
tcgcagaagtgcgacctagtgaccactggcgagctgttcttccgctcaggcttcggcatc
ggcatgcgcaaggacagcccctggaagcagaacgtctccctgtccatcctcaagtcccac
gagaacggcttcatggaagacctggacaagacatgggtgcggtaccaggagtgtgactcg
cgcagcaacgcccctgctacccttaccttcgagaacatggcaggggtcttcatgctggtg
gcggggggcattgtggccggcatcttcctgatcttcattgagatcgcctacaagcgacac
aaggacgctcgccggaagcagatgcagctagcctttgccgcggtgaacgtgtggagaaag
aacttgcaggatagaaagagtggtagagcagagcccgaccctaaaaagaaagccacattt
agggctatcacctccaccctggcttccagcttcaagagacgtaggtcctccaaagacacg
agcaccgggggtggacgcggcgctttgcaaaaccaaaaagacacagtgctgccgcgacgc
gctattgagagggaggagggccagctgcagatgtgtgcccgtcatagggagagctga
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