Prionailurus viverrinus (fishing cat): 125150308
Help
Entry
125150308 CDS
T09889
Symbol
NOTCH1
Name
(RefSeq) neurogenic locus notch homolog protein 1 isoform X1
KO
K02599
Notch 1
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv01522
Endocrine resistance
pviv04330
Notch signaling pathway
pviv04658
Th1 and Th2 cell differentiation
pviv04919
Thyroid hormone signaling pathway
pviv05020
Prion disease
pviv05165
Human papillomavirus infection
pviv05200
Pathways in cancer
pviv05206
MicroRNAs in cancer
pviv05224
Breast cancer
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
125150308 (NOTCH1)
09150 Organismal Systems
09151 Immune system
04658 Th1 and Th2 cell differentiation
125150308 (NOTCH1)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
125150308 (NOTCH1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
125150308 (NOTCH1)
05206 MicroRNAs in cancer
125150308 (NOTCH1)
09162 Cancer: specific types
05224 Breast cancer
125150308 (NOTCH1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
125150308 (NOTCH1)
09164 Neurodegenerative disease
05020 Prion disease
125150308 (NOTCH1)
09176 Drug resistance: antineoplastic
01522 Endocrine resistance
125150308 (NOTCH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
EGF_2
Ank_2
Ank
Notch
NODP
NOD
Ank_4
Ank_5
Ank_3
EGF_3
DL-JAG_EGF-like
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
125150308
NCBI-ProteinID:
XP_047685987
LinkDB
All DBs
Position
D4:93107570..93151901
Genome browser
AA seq
2559 aa
AA seq
DB search
MPPLLAPLLCLALLPALAARGLRCSQPSDSCMNGGKCEVSPNGTEACVCSGAFAGRRCQA
PNPCLSAPCKNAGTCHAVDHGGTVDYACACRLGFSGPLCLTPRDNACLAKPCRNGGTCDL
LTLTEYKCRCPPGWSGKMCQQADPCASNPCANGGQCLPFEASYICRCPPGFHGPTCRQDV
NECGQSPGLCRNGGTCHNEVGSYRCTCRATHTGPHCELPYVPCSPSPCQNGGTCRPTGDT
THECACLPGFTGQNCEENIDDCPGNSCKNGGTCVDGVNTYNCRCPPEWTGQYCTEDVDEC
QLMPNACQNGGTCHNTHGGYNCVCVNGWTGEDCSENIDDCASAACFHGATCHDRVASFYC
ECPHGRTGLLCHLNDACISNPCNEGSNCDTNPVNGKAICTCPSGYTGPACSQDVDECSLG
ANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECISNPCQNDATCLDQIGEFQCICM
PGYEGVHCEVNTDECASSPCLQNGRCLDKINEFLCECPTGFTGHLCQYDVDECASTPCRN
GAKCLDGPNTYTCVCTEGYTGPHCEVDIDECDPDPCHYGSCRDGVATFTCLCRPGYTGHH
CETNVNECHSQPCRHGGTCQDRDNAYLCLCLKGTTGPNCETNLDDCASSPCDSGTCLDKI
DGYECSCEPGYTGSMCNVNIDECAGNPCHHGGTCEDGTNSFTCRCPEGYHGPTCLSEVNE
CSSNPCIHGACRDSLNGYTCDCDPGWSGAHCDINTNECESNPCANGGACRDMTSGYVCTC
REGFSGPNCQTNINECASNPCLNQGSCIDDVAGYTCNCPLPYTGATCEVVLAPCAPGPCR
NGGECQESEDFESFSCVCPAGWQGQTCEVDINECVKNPCRHGASCQNTNGGYRCRCRAGY
TGHNCETDVDDCRPNPCHNGGSCTDGVNTAFCDCLPGFRGAFCEEDINECASNPCHHGAN
CTDCVDSYTCTCPTGFSGIHCENNTPDCTESSCFNGGTCVDGISSFTCLCPPGFTGSYCQ
HDVNECDSRPCLHGGTCQDSYGTYKCTCPQGYTGLNCQNLVRWCDSSPCKNGGKCWQTNT
LYRCECHSGWTGLYCDVPNVSCEVAARRRDINVTHLCRNGGLCMDAGNTHHCRCQAGYTG
SYCEDQVDECSPSPCQNGATCTDYPGGYSCECVAGYHGVNCSEEINECLSHPCQNGGTCI
DLINTYKCSCPRGTQGVHCEVNVDDCSPLIDPVSRGPKCFNNGTCVDQVGGYSCTCPPGF
VGERCEGDVNECLSNPCDARGTQNCVQRVNDFYCECRAGHTGRRCESVINGCKGRPCQNG
GTCAVASNTARGFICKCPAGFEGATCENDARACGSLRCLNGGTCISGPRSPTCLCLGPFT
GPECQFPAGSPCVGGNPCYNQGSCEPVPESPFYRCLCPAKFNGLLCHILDYSFGGGLGVD
IPPPQIEEACELPECREEAGNKVCSLGCNNHACGWDGGDCSLNFNDPWQNCSQSLQCWKY
FSDGRCDSQCNSAGCLFDGFDCQRADGQCNPLYDQYCKDHFGDGHCDQGCNSAECEWDGL
DCAEHVPERLAAGALVLVVLTPPAQLRNNSLHFLRALSRLLHTNVVFKRDARGQPMVFPY
YGREEELRKHPIKRAVDGWAAPGALLDRVEAALLPGGGAGRRRRELDPMDIRGSIVYLEI
DNRQCVQSSSQCFQSATDVAAFLGALASLGSLNIPYKIEAVQSETVEPPPPPQLHFMYVA
MAAFVLLFFVGCGVLLSRKRRRQHGQLWFPEGFKVSEASKKKRREPLGEDSVGLKPLKNA
SDGALMDDSQHEWGDEDLEAKKFRFEEPVVLPDLDDQADHRQWTQQHLDAADLRVSAMAP
TPPQGEADADSMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASL
HNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQIL
IRNRATDLDARMHDGTTPLILAARLAVEGMLEDLVNSHADVNAVDDLGKSALHWAAAVNN
VEAAVVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDV
AQERMHHDIVRLLDEYSLARSPQLHGTALGGAPTLSPPLCSPGSYLGNLKPAVQGKKARK
PSTKGLACGGKEAKDLKARRKKPQDGKGCLLDSSSVLSPVDSLESPHGYLSDVASPPLLP
SPFQQSPAVPLNHLPGMPDAHLGVGHLSVAAKPEMAGLGGGGRLAFEAGPPRLSHLPVAS
STSTVLGTGGGVNFTVGGAAGLNGQCEWLSRLQNGLVPNQYNPLRGNVGPGTLSTQAPAL
QHSMMGPLHAGLSTAALSQMMSYQAPPSTRLAGQPHLVQTQQLPQVQPPQQNLQMQPPNL
QPQPPQPHLGVASAAGGHVGRSFLGGEPSQADVQPLGPGGGGGLAVHTILPQDSQALPAT
LAPPMTTAQFLTPPSQHSYSSSPADNTPSHQLQVPEHPFLTPSPESPDQWSSSSPHSHVS
DWSEGISSPPTSTQSHIAHIPEAPACARRTPGLTKGAFS
NT seq
7680 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgctcctggcgcccctgctctgcctggcgctgctgcccgcgctcgccgcacga
ggactgcgatgttcccagcccagcgacagctgcatgaatggcggcaagtgtgaagtgtcc
cccaacggcacggaagcctgtgtctgtagcggtgccttcgcgggccggcgatgccaggcg
cccaacccctgcctcagcgccccctgcaagaacgcggggacgtgccacgcggtggaccac
ggcggcacggtggactacgcctgcgcctgccgcctgggcttctccgggcccctctgcctg
acgccccgggacaacgcctgcctcgccaagccctgccgcaacggcggcacctgtgacctg
ctcacgctgaccgagtacaagtgccgctgccccccgggctggtcagggaagatgtgccag
caggccgacccgtgtgcctccaacccatgtgccaacggcggccagtgcctgcccttcgag
gcctcgtacatctgccgctgcccgcccggcttccacggccccacctgcaggcaggacgtc
aacgagtgtggccagagccccgggctctgtcgcaacggaggcacctgccacaacgaggtc
ggctcctaccgctgcacctgccgcgccacccacaccggcccccactgcgagctgccctac
gtgccctgcagcccctcaccctgccagaacgggggcacctgccgccccacgggggacacc
acccacgagtgcgcctgcctcccaggcttcaccggccagaactgcgaggagaatatcgac
gactgtcccggaaacagctgcaagaacggaggcacctgcgtggacggcgtgaacacgtac
aactgccgctgcccgcccgagtggacaggccagtactgcaccgaggacgtagacgagtgc
cagctgatgcccaacgcctgccagaacggcgggacctgccacaacacccacggcggctac
aactgcgtgtgcgtcaacggctggacgggggaagactgcagcgagaacatcgatgactgt
gccagcgccgcctgcttccacggggccacctgccacgaccgagtggcctccttctactgc
gagtgtcctcatggccgcaccggtctgctttgccatctcaacgacgcctgcatcagcaac
ccttgcaacgagggctccaactgcgacaccaaccccgtcaacggcaaggccatctgcacc
tgcccctccgggtacacgggcccggcctgcagccaggacgtggacgagtgctcgctgggc
gccaacccctgtgagcacgcgggcaagtgcatcaacacgctgggctccttcgagtgccag
tgtctgcagggctacacgggcccgcgctgcgagattgacgtcaacgagtgcatctcgaac
ccgtgtcagaatgacgccacctgcctggaccagatcggggagttccagtgcatctgcatg
ccgggctacgagggcgtgcactgtgaggtcaacacggacgagtgcgccagcagcccctgc
ctccagaacggccgctgcctggacaaaatcaacgagtttctgtgcgagtgccccacaggc
ttcaccgggcacctgtgtcagtatgacgtggacgagtgtgcaagcacgccttgcaggaac
ggcgccaagtgcctggacgggcccaacacctacacctgcgtgtgcacggaaggctacacg
gggccgcactgcgaggtggacattgacgagtgtgaccccgatccttgccactacgggtcg
tgcagggatggcgttgccaccttcacctgcctgtgccggccgggctacacgggccaccac
tgcgagaccaacgtcaacgagtgtcacagccagccctgccgccacggcggcacctgccag
gaccgcgacaacgcctacctgtgcctctgcctcaaggggaccacagggcccaactgtgag
accaacctggatgactgtgccagcagcccctgtgactcaggcacgtgtttggacaagatc
gacggctacgagtgctcgtgcgagccgggctacacagggagcatgtgcaacgtcaacatc
gacgagtgtgcgggcaacccctgccaccacgggggcacctgcgaggacggcaccaacagc
ttcacctgccgctgccccgagggctaccacggccccacgtgcctgtctgaggtcaacgag
tgcagcagcaacccctgcatccacggggcctgccgggacagcctcaacgggtacacgtgt
gactgtgaccccgggtggagcggggctcactgcgacatcaacaccaacgagtgtgagtcc
aacccctgcgccaacgggggcgcctgtagagacatgaccagcggctacgtatgcacctgc
cgcgagggcttcagtgggcccaattgccaaaccaacatcaacgagtgtgcgtctaacccg
tgcctgaaccagggctcgtgcatcgatgatgtggccggctacacgtgcaactgccccctg
ccctacacaggagccacgtgtgaggtggtgctggccccgtgcgcccccggcccctgcagg
aacggtggcgagtgccaggagtccgaggacttcgagagcttctcgtgcgtctgtcctgca
ggctggcaaggacagacgtgcgaggtcgacatcaacgagtgtgttaagaacccgtgccgc
cacggcgcctcctgccagaacaccaacggcggctaccgttgtcgctgccgcgccggctac
acggggcacaactgcgagacggacgtggatgactgccgacccaacccgtgccacaacggt
ggctcctgcacggacggcgttaacacggctttctgcgactgcctgcctggcttccggggg
gctttctgcgaggaggacatcaacgagtgtgccagcaacccctgccaccacggagccaac
tgcaccgactgtgtggacagctacacctgcacctgccccacgggcttcagcggcatccac
tgcgagaacaacacgcccgactgcacagagagctcctgtttcaacggcggcacctgcgtg
gacggcatcagctccttcacctgtctctgtccgcctggcttcacgggcagctactgccag
cacgacgtcaacgagtgtgattctcggccctgcctgcacggcggcacctgccaggacagc
tacgggacctacaagtgcacctgcccacagggctacacgggcctcaactgccagaacctc
gtgcgctggtgcgactcctcaccgtgtaagaacggcggcaagtgttggcagaccaacacc
ctgtaccgctgcgagtgccacagcggctggaccggcctctactgcgacgtgcccaacgtg
tcctgcgaggtggccgcacggcgccgagacatcaatgtcacccacctgtgccggaacggg
gggctctgcatggacgcgggcaacacgcaccactgtcgctgccaggccggctacacgggc
agctactgcgaggaccaggtggacgagtgctcgcccagcccctgccagaacggggccacc
tgcaccgactaccctggcggctactcctgcgagtgcgtggccgggtaccacggggtgaac
tgctctgaggagatcaacgagtgtctgtcccacccatgccaaaacgggggcacctgcatc
gacctcatcaacacctacaagtgttcctgtccccggggcacacagggtgtgcactgtgag
gtcaacgtggacgactgcagtcccctcatcgaccccgtctcccggggccccaagtgcttt
aacaacggcacctgcgtggaccaggtgggcggctacagctgcacctgcccacccggcttc
gtgggcgagcgctgtgagggagacgtgaacgagtgcctgtccaacccctgtgacgcccgt
ggcacccagaactgcgtgcagcgcgtcaacgacttctactgcgagtgccgtgcgggccat
accggacgccgctgtgagtcggtcatcaacggctgtaagggcaggccctgccagaacggg
ggcacttgcgccgtggcctccaacactgcccgcgggttcatctgcaagtgcccggcgggc
ttcgagggcgccacgtgcgagaacgacgcgcgcgcctgcgggagcctgcgctgcctcaac
ggcggcacgtgcatctcgggcccgcgcagccccacctgcctgtgcctgggccccttcacg
ggccccgagtgccagttcccggccggcagcccctgcgtgggcggcaacccctgctacaac
cagggcagctgcgagccggtgcccgagagccccttctaccgctgcctgtgcccggccaag
ttcaacgggctcctgtgccacatcctggactacagcttcgggggcggcctgggcgtcgac
atccccccgccgcagatcgaggaggcgtgcgagctgcccgagtgccgcgaggaggcgggc
aacaaggtgtgcagcctgggctgcaacaaccacgcgtgcggctgggacggcggcgactgc
tccctcaacttcaacgacccctggcagaactgctcgcagtcgctgcagtgctggaagtac
ttcagcgacggccgctgcgacagccagtgcaactcggccggctgcctgttcgacggcttc
gactgccagcgcgcggacggccagtgcaaccccctgtacgaccagtactgcaaggaccac
ttcggtgacgggcactgcgaccagggctgcaacagcgcggagtgcgagtgggacgggctg
gactgcgcggagcacgtgcccgagcggctggcggccggcgcgctggtgctggtggtgctg
acgccgcccgcgcagctgcgcaacaactccctgcacttcctgcgggcgctcagccgcctg
ctgcacaccaacgtggtcttcaagcgcgacgcgcgcggccagcccatggtcttcccctac
tacggccgcgaggaggagctgcgcaaacaccccatcaagcgcgccgtggacggctgggcc
gcgcccggggccctgctcgaccgggtggaggccgccctgctcccgggcggcggggccggc
cgccggcgccgggagctggaccccatggacatccgcggatccatcgtctacctggagatt
gacaaccggcagtgtgtccagtcgtcctcacaatgcttccagagcgccacagacgtggcc
gccttcctgggcgccctcgcctcgctgggcagcctcaacatcccctacaagatcgaggcc
gtgcagagtgagaccgtggagccgcccccgcccccgcagctgcacttcatgtacgtggcc
atggccgccttcgtgctcctcttctttgtgggctgcggggtgctgctgtcccgcaagcgt
cggcggcagcatggacagctctggttcccggagggcttcaaggtgtcagaggccagcaag
aagaaacggcgggagcccctcggcgaggactccgtgggcctcaagcccctgaagaacgcg
tcggatggtgctctcatggacgacagccagcacgagtggggtgacgaggatctggaggcc
aagaagttccggttcgaggagccagtggttctccccgacctggatgaccaggcagatcac
cggcagtggacccagcagcacctggacgccgccgacctgcgtgtgtctgccatggccccc
acgccaccccagggcgaggccgacgctgacagcatggatgtgaacgtccgagggccggac
ggcttcacgcccctcatgatcgcctcctgcagcggagggggcctggagacgggcaacagc
gaggaggaggaggacgcacccgccgtcatctctgacttcatctatcagggcgccagtctg
cacaaccagacggaccgcactggcgagaccgccctgcacctggctgcccgctactcgcgc
tccgacgcggccaagcgcctgctggaagccagcgccgacgccaacatccaggacaacatg
ggacgcaccccgctgcacgcagccgtgtctgccgacgcgcagggcgtcttccagatcctg
atccggaaccgagccacggacctggacgcgcgcatgcacgatggcacgacgccgctgatc
ctggccgcccgcctggcggtggagggcatgctggaagatctcgtcaactcgcatgccgac
gtcaacgccgtggacgacctgggcaagtccgcgctgcactgggccgccgccgtgaacaac
gtggaggctgctgtcgtgctcctgaagaacggggccaacaaggacatgcaaaacaacaag
gaggagacgcccctgttcctggccgctcgggagggcagctacgagaccgccaaggtgctg
ctggaccacttcgccaaccgggacatcacggaccacatggaccgcctgcctcgtgacgtc
gcacaggagcgcatgcatcacgacatcgtgcggctgttggacgagtacagcctggcgcgc
agcccccagctgcacggcacggccctgggcggcgcgcccacgctgtccccgccgctctgc
tcccccggcagctacctgggcaacctcaagcccgccgtgcagggcaagaaggcccgcaag
cccagcaccaagggcctggcctgcggcggcaaggaggccaaagacctcaaggcacgcagg
aagaagccccaggacggcaagggctgcctgctggacagctcgagtgtgctgtcgcccgtg
gactccctcgagtcgccgcacggctacctgtcggacgtggcctcgccgccgctgctgcct
tctccgttccagcagtccccggccgtgcccctcaaccacctgcccggcatgcctgacgcc
cacctgggcgtcggccacctgagcgtggccgccaagcccgagatggcggggctgggcggg
ggcggccggctggccttcgaggcgggacccccgaggctctcccacctgcccgtggcctcc
agcaccagcacggtcctgggcactggcggcggcgtgaatttcaccgtgggtggggccgcg
ggcttgaacggccagtgcgagtggctgtcccggctgcagaacggcctggtgcccaaccag
tacaacccgctgcgaggcaacgtggggccgggcaccctgagcacgcaggccccggccctc
cagcacagcatgatgggcccgctgcacgccggcctgtccacggccgccctgtcccagatg
atgagctaccaggccccgcccagcacgcgcctggccggccagcctcacctggtgcagacc
cagcagcttccgcaggtgcagccgccgcagcagaacttacagatgcagccgcccaacctg
cagccccagccgccccagccgcacctcggcgtggcctcggccgccggtggccacgtgggc
cggagcttcctgggcggggagccgagccaggcagacgtgcagccgctgggccccggcggc
ggcggcggcctggccgtgcacaccatcctgccgcaggacagccaggccctgcccgccacg
ctggccccgcccatgaccaccgcgcagttcctgaccccgccctcgcagcatagctactcc
tcctcgcccgcggacaacacccccagccaccagctgcaggtgcctgagcaccccttcctc
accccgtcccccgagtcccccgaccagtggtccagctcgtcgccgcattcccacgtctct
gactggtccgagggcatctccagcccgcccaccagcacgcagtcccacatcgcccacatt
ccagaggcgcctgcgtgcgctcggcggacaccgggactgaccaaaggggctttttcttaa
DBGET
integrated database retrieval system