Prionailurus viverrinus (fishing cat): 125162291
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Entry
125162291 CDS
T09889
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1 isoform X1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
125162291 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pviv03021
]
125162291 (POLR1A)
Enzymes [BR:
pviv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
125162291 (POLR1A)
Transcription machinery [BR:
pviv03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
125162291 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
125162291
NCBI-ProteinID:
XP_047709105
LinkDB
All DBs
Position
A3:complement(101170930..101245399)
Genome browser
AA seq
1718 aa
AA seq
DB search
MLGSKTMPWRRLQGISFGMYSADELKKLSVKSITNPRYLDSLGNPSVNGLYDLALGPADS
KEVCSTCVQDFNSCPGHLGHIELPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAVIHLL
VCQLRVLEVGALQAVYELERILNRFLEENADPTAFEIQEELEQYTTHIVQNNLLGSHGAH
VKNVCESRSKLIASFWKAHMSAKRCPHCKTGRSVVRKEHNSKLTITYPAMVHRKADQKDT
ERLGIEDAQMGKRGYLTPTSAREHLIALWKNEGFFLNYLFLGLEDVGMESRFNPSMFFLD
FLVVPPSRYRPVNRLGDQMFTNGQTVNLQAVMKDMVLIRKLLALMAQEQELPCEVAAPAK
DEEKDSSIALDRSFLSTLPGQSLTDKLYNIWIRLQSHVNIVFDSEMDKLMMEKYPGIRQI
LEKKDGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQEL
RQAVINGPNVHPGASMVINEDGSRTALSAVDLTQREAVAKQLLTPATGAPKPQGTKIVCR
HVKNGDILLLNRQPTLHRPSIQAHHARILPEEKVLRLHYANCKAYNADFDGDEMNAHFPQ
SELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGANMTTRGCFFTREQYMELLYRG
LTDKVGRVKLFPPAILKPFPLWTGKQVVSTLLINIIPEDHIPLSLSGKAKISGKAWVQES
PRPVPGFNPDSMCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGKVLTC
LARLFTAYLQLYRGFTLGVEDILVKPKADVKRHRVIEESTHCGPRAVRAALNLPEAASCD
EVQGKWQDAHLGKDQRDFNMIDLKFKEEVNHYNNEINKACMPFGLHRQFPENNLQMMVQS
GAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTGIK
PPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYG
EDGLDIPKTQFLQPKQFPFLASNYEVIMKSKHLHEVLSRADPQKALRHFRAIKKWQSRHP
NTMLRNGAFLNYSQKIQAAVKALNLEGGNQNGRSPGTHQILRMWGELDEQSRRKYQKKAA
PCPDPSLSVWRPDIYFASVSETFEKKVDDYSLKWASQAEKSYEKSELSLDRLRTLLQLKW
QRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIK
TPMMSVPVFNTKKALKRVKSLKKQLTRVCLGEVLEKIDVQESFCIGEKRDKFQVYQLRFQ
FLPRAHYQQEKCLRPEDILHFMETRFFKILMESIRKKNNKASAFRSVNTRRATQRDLDNT
GDSERNRGEQEGDEEEEGHIVDAEAEEGDADASDTKRKKKQEEEVDYESEEDEAGEENDD
EDMQEEGHGPGEGAEKAQEQDEEVGSGPEEDSAPAAPLTQPRKSTRVREPQGAEAMERRA
QAVRESHPFIEDYQYDTEESLWCQVTVKLPLMKINFDMSSLVVSLAQGTVIYATKGITRC
LLNETTNKKNEKELVLNTEGINLPELFKYAEVLDLSRLYSNDIHAMANTYGIEAALRVIE
KEIKDVFAVYGIEVDPRHLSLVADYMCFEGVYKPLNRFGIRSNSSPLQQMTFETSFQFLK
QATMMGSHDELRSPSACIVVGKVVRGGTGLFELKQPLR
NT seq
5157 nt
NT seq
+upstream
nt +downstream
nt
atgttgggctcgaagaccatgccctggcggaggctgcagggcatttccttcgggatgtat
tcggccgacgagctcaagaaattaagcgttaagtccattacgaaccctcgttacctggac
agcctgggaaacccatcagtgaacggcctgtacgatttagctttgggccctgcggattcc
aaagaggtgtgctccacctgtgtgcaggacttcaacagctgccctggccacctgggccac
attgagcttccgcttacagtgtataaccctctcctctttgataaactctacctgctgctc
cggggctcctgtttaaactgtcacatgctgacctgcccccgggctgtgattcacctctta
gtctgccagctgcgagttctggaagtcggggccctacaagcagtctacgagcttgagaga
attctgaacaggtttctagaagaaaacgctgatcctactgccttcgaaattcaggaagag
ttagaacaatatacaacccatattgtacagaacaatctgttgggatcccatggtgcacat
gtgaaaaatgtttgtgagagcaggagcaaactcattgcttccttctggaaggcacacatg
agtgctaagcgatgtccccactgcaagactggacggtcagttgtccgaaaggagcacaac
agcaaactgaccatcacatatccagccatggtgcacaggaaagctgaccagaaggacaca
gagcgcctgggaattgaggatgctcagatgggaaaacgagggtacctgacaccgaccagc
gcccgagaacatcttattgccctttggaagaatgaaggattctttctgaattaccttttt
ttgggactggaagatgttggcatggagtccagattcaatcccagtatgttctttttggat
ttcttggtggtgcccccctcaaggtatcgccctgtcaatcggctaggggaccagatgttt
actaatggccagacggtgaacttgcaggctgtcatgaaggacatggtcctgatccgaaaa
cttctggcgttgatggcccaagaacaggagctgccatgtgaggtggcagcacctgccaag
gatgaggaaaaagactcttcgattgccctggaccgatcctttttgagtacgcttcctggc
cagtccctcacagacaaactttacaacatttggattcgtcttcagagccacgtcaatatc
gtgtttgatagtgaaatggataaattaatgatggaaaagtatcctggcattagacagatc
ctggagaagaaggatggcttattccgaaagcacatgatgggaaagcgagtggactacgcg
gcccgctctgtcatctgcccagacatgtacattaacaccaacgaaattggaattcctatg
gtgtttgccacaaaactgacctaccctcagccagtcaccccctggaatgttcaggaactg
aggcaagcagtcatcaatggccccaatgtgcacccgggagcctccatggtcatcaacgag
gatggcagtcgtacggccctgagtgctgtggacctgacacagcgggaagccgtggccaaa
cagctcctgacaccagccacgggggcacctaagccccaggggacaaaaattgtgtgccgg
catgtgaagaatggggacatcctcctgctgaaccgacagcccaccctgcacagaccctcc
atccaggcacaccacgcccgcatcctgcccgaagagaaagtcctgcggctccattatgcc
aactgcaaggcgtataatgccgactttgatggagacgagatgaatgcccacttcccccag
agtgaactgggccgggctgaggcctacgtcctggcctgtacagatcagcagtaccttgtt
cccaaggatggccagcccttggcggggttgattcaagatcacatggtttcaggtgcaaac
atgaccactcgaggttgctttttcactcgggagcaatatatggagctgctgtaccgagga
ctcacagacaaagtggggcgtgtgaagctctttcctcctgccatcctgaagccctttcca
ctgtggacgggaaagcaggttgtgtcaacgctgctcataaacataatcccagaggaccac
atcccactgagcttatcgggaaaggcgaagatcagcggcaaagcctgggtgcaggagtct
cctcggcctgttcccggctttaaccctgactcaatgtgcgagtcccaggtgatcatcaga
gaaggggagctgctctgtggggtgctggacaaggcacactatgggagctccgcctatggc
ctggtccactgctgctacgagatctatggtggggagaccagcggcaaggttctcacctgc
ctggcccgcctcttcactgcctacctgcagctctacagaggtttcaccttgggcgtggaa
gacattctggttaagccgaaggcagatgttaagagacacagagtcattgaagagtccacc
cactgcgggccacgggctgtcagggctgcattaaacctgccagaagctgcgtcatgtgac
gaggtccaagggaaatggcaggatgcccatctgggcaaagaccagagggattttaacatg
attgatctgaagttcaaggaggaagtgaaccattacaacaatgagattaacaaggcatgc
atgccatttggcctgcacagacagttcccagagaacaacttgcagatgatggtgcaatct
ggagccaaaggttcaactgtaaacaccatgcagatctcatgcctgctgggccagattgaa
ttggaaggtcggagaccccccctgatggcatctggcaagtcactgccctgctttgagcct
tatgaattcacccctagggctggcggcttcgtcactggcagattcctaactggtatcaag
cctcctgagttcttctttcactgcatggcagggcgagagggtctggtggacaccgccgtg
aaaaccagccgctccggctatctccaaaggtgcatcatcaagcacttggaggggctggtc
gtccagtatgatctgacagtccgcgacagtgacggcagcgtggtacagttcctgtatggg
gaggacggcctggacatccccaagacacagttcctgcagcccaagcagttccccttcctc
gccagcaactatgaggtgataatgaaatcgaagcatctccatgaagttttatccagagca
gatccccaaaaagctctccgccacttcagagccatcaaaaaatggcaaagcaggcatccc
aacaccatgctgagaaatggtgccttcttgaattattcacagaagattcaggcagccgtg
aaagccttgaaccttgagggtgggaaccagaatggccgcagccctgggactcaccagata
ttgagaatgtggggtgagttagatgagcagagtcgaaggaaataccagaagaaggcggct
ccttgtccagaccccagtctgtctgtctggcgcccagacatctactttgcatcagtgtcg
gaaacatttgaaaaaaaggtggatgactatagtctcaagtgggcatctcaagcagagaag
agttatgagaaatcagagctttctcttgacaggctgaggaccctgctgcagctcaagtgg
cagcgctcactatgtgatccgggtgaggccgtgggcctactggctgcccagagcattggg
gagccctccacacagatgaccctgaacactttccactttgctggcagaggcgagatgaat
gtcactctgggcattccgaggttgagggagattctcatggtggccagtgccaacatcaag
acgcccatgatgagcgtgcccgtgttcaacaccaagaaagcactgaagagagtaaaaagc
ctgaagaagcagctcaccagagtgtgcttaggggaggtgttggagaaaattgatgtccag
gaatccttctgtatcggagaaaaacgggacaagtttcaagtgtatcagttgcggtttcag
ttcctgccacgtgcacattaccagcaggagaagtgcctgagacctgaggacatcctgcac
ttcatggaaacgagattctttaaaattctgatggaatccatcagaaagaagaacaataaa
gcctcagctttcagaagcgtaaacactcggagagctacccagcgggatctagacaacact
ggggactcagagaggaaccggggagagcaggagggtgatgaggaagaggaggggcacatt
gtggatgctgaagccgaggagggagacgctgatgcttctgataccaagcgcaagaagaaa
caagaggaggaggtcgattatgagagcgaggaggacgaggctggggaggagaacgacgac
gaggacatgcaggaggaagggcatggccccggggaaggtgccgagaaggcccaggagcag
gatgaagaggtgggctcaggccccgaggaggactcggcccctgctgcccccctcacacag
ccccggaaatccacccgcgtcagggagccccagggagccgaggccatggagcgccgtgcg
caggccgtgcgcgagtcccacccattcatagaggactaccagtacgacaccgaggagagc
ttgtggtgccaggtgacagtgaagctccctctgatgaagatcaactttgacatgagctcc
ctggtagtgtccttggcccagggcaccgtcatctacgcgacaaagggcatcacgaggtgc
ctcctgaatgaaaccaccaataagaagaacgagaaggagcttgtcttaaacacagaagga
atcaatttgccagagctgttcaagtatgccgaggttctggacttaagccgcctctattcc
aacgacatccacgccatggccaacacgtatggcatcgaggccgcgctgcgggtgattgag
aaggaaatcaaggacgtgtttgctgtgtatggcattgaggttgatccccgccatctctcc
ctggttgccgactatatgtgcttcgagggcgtgtacaagccattgaatcgctttgggatc
cggtcaaactcctcccctctgcagcaaatgacatttgaaaccagcttccagtttctgaag
caggccaccatgatgggatcgcatgatgagctgaggtccccttcagcctgcatcgtggtt
gggaaagttgtcagaggcgggacaggcctattcgagctcaagcagcccctgagatag
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integrated database retrieval system
