Prionailurus viverrinus (fishing cat): 125172711
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Entry
125172711 CDS
T09889
Symbol
VCAM1
Name
(RefSeq) vascular cell adhesion protein 1 isoform X1
KO
K06527
vascular cell adhesion molecule 1
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv04064
NF-kappa B signaling pathway
pviv04514
Cell adhesion molecules
pviv04668
TNF signaling pathway
pviv04670
Leukocyte transendothelial migration
pviv04933
AGE-RAGE signaling pathway in diabetic complications
pviv05143
African trypanosomiasis
pviv05144
Malaria
pviv05417
Lipid and atherosclerosis
pviv05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
125172711 (VCAM1)
04668 TNF signaling pathway
125172711 (VCAM1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125172711 (VCAM1)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
125172711 (VCAM1)
09160 Human Diseases
09174 Infectious disease: parasitic
05144 Malaria
125172711 (VCAM1)
05143 African trypanosomiasis
125172711 (VCAM1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
125172711 (VCAM1)
05418 Fluid shear stress and atherosclerosis
125172711 (VCAM1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
125172711 (VCAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pviv04090
]
125172711 (VCAM1)
04091 Lectins [BR:
pviv04091
]
125172711 (VCAM1)
CD molecules [BR:
pviv04090
]
Proteins
125172711 (VCAM1)
Lectins [BR:
pviv04091
]
I-type lectins (Siglecs)
125172711 (VCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
C2-set
ig
Ig_2
V-set
C2-set_2
ICAM_N
Ig_6
Ig_4
Ig_5
ICAM1_3_5_D2
C1-set
Motif
Other DBs
NCBI-GeneID:
125172711
NCBI-ProteinID:
XP_047727106
LinkDB
All DBs
Position
C1:complement(128174375..128192700)
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AA seq
748 aa
AA seq
DB search
MFSSQQQLKMPRKMFVIFGASNILWMVFTVSQAFKIETFPENKIVAQIGDVVSLTCRTTG
CEPPSFSWRTHLDSPLNGQVRNEGSNSTLTMDPVGFRNEYSYLCTAICGSEKREKGIQVE
IYSFPKDPEIHLSGPLEVGKPVTVTCLVPDVYPFDRLEMNLLKGNHLLQNKDFVEPMERK
SLETKSLEVTFTPTNEDIGKALVCQAKLHIDEIDFKPKERETTKKLQVYISPKNTVISVN
PSTRLQEGGSVTMTCSSEGLPAPQILWSKKLDNGNLQLLSGNSTLTLIAMRTEDSGIYVC
EGVNQVGKNGKEVELIVQEKPFTVEISPGPQIVAQIGDSVVLTCGVTGCESPSFTWRTQV
DSPLSGKVKTEGSKSTLTLSPVGFENEHSYLCTVTCGRKKVEKGIKVDLYSFPRDPEIEM
SGLPVNGNPVTVSCRVPNVYPSDRLEIELLKGESIIGNKNFLENIDKKYLETESLDMTFI
PTTEDTGTVLVCLAKLHIDEMEFEPKQRQSTQTLYVNVAPRDTTILVSPSSILEEGSSVN
MTCSSNGLPAPKILWSRQLNNGHLQPLSENSTLTLTSTKMEDSGVYVCEGINQAGIDRKE
VELIIQVAPKDIQLTAFPSESVKEGDTVIISCTCGNVPKTWIILKKKAETGDTVLQSRDG
AYTIHKVQLEDAGVYECESKNEVGLQLRSLTLDVKGRGNYQDYFSPELLVLYCSSSLIIP
AIGMIIYFARRANMKGSYSLVEAQKSKV
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgttctcatcacagcaacaactaaaaatgcctaggaagatgtttgtgatctttggagct
tcaaatatactttggatggtgtttacagtttctcaagcttttaaaatagagaccttccct
gaaaacaaaattgttgctcagattggtgatgtcgtttcactgacttgcaggacaacaggc
tgtgagcccccatctttctcttggagaacccatttagatagtccactgaatgggcaggtg
agaaatgaggggtccaattccacgctgaccatggatcccgttggtttcaggaatgaatac
tcttacctgtgcacagcgatttgcggatctgagaaacgggaaaaagggattcaggtggag
atttactctttccctaaggacccagagatccatctgagtggccccctggaagttgggaag
ccagtcacagtcacatgcttggtccctgatgtttatccatttgacaggctggagatgaat
ttgctgaaaggcaaccatctcttacagaataaggactttgtagaacctatggaaagaaag
tccctggaaaccaagagtttggaggtaaccttcactcctaccaatgaagatattgggaaa
gctcttgtttgccaagcgaaattacacattgatgaaattgactttaagcccaaagaaagg
gagactacgaaaaaactgcaagtctacatctcacctaagaacacagttatctctgtgaat
ccctccacaaggctgcaggaaggtggttctgtgacaatgacatgctccagtgaaggtcta
ccagctccacagattctctggagcaaaaaattagataatgggaatctacagctcctttct
gggaactcaactctcactttaattgctatgaggacagaagattctggaatttatgtgtgt
gaaggagtcaatcaagttgggaaaaatggaaaagaggtggaattaattgttcaagagaaa
ccattcactgttgagatctcccccgggccccagattgttgctcagattggtgactcagtt
gtgttgacatgtggtgtcacaggctgtgagtctccatctttcacttggagaacccaggta
gacagccctctgagtgggaaggtgaagactgaagggagcaagtccacgctgaccctgagc
cctgtgggttttgagaatgaacattcttatctgtgcaccgtaacctgtggccgtaagaaa
gtggaaaagggaattaaagtggacctctactcattccctagagatccagagattgagatg
agtggtctgccagtgaatggaaacccggtgactgtaagctgccgggttcctaatgtgtat
ccttctgaccggctggagattgaattacttaagggggagagtattatagggaataaaaat
tttctggagaacatagacaagaagtatctagagactgagagtttggacatgaccttcatc
cccaccactgaagatactggaaccgttcttgtttgtctggctaagttacatattgatgaa
atggaatttgaacccaaacaaaggcagagtacacagacactttatgttaatgttgccccc
agggatacaaccatcttggtcagcccctcctccatcctggaggaaggtagttctgtgaat
atgacatgctccagcaatggccttccagctccaaaaatcctctggagcaggcagctaaac
aatgggcatctacagcctctttctgaaaattcaactctcaccttaacttctacaaaaatg
gaagactctggtgtttatgtgtgtgaagggattaaccaggctggaatagacagaaaagaa
gtcgaattaattatccaagttgctccgaaagacatacaacttacagcttttccttctgag
agtgtcaaggaaggagacactgttattatctcctgtacatgtggaaatgttcccaaaact
tggataatcctgaagaaaaaagcagagacgggagacacagtgctacagtccagagatggt
gcatataccatccacaaggtccagttagaggacgctggagtgtacgaatgtgaatctaaa
aatgaggttggcttgcaattaagaagtttaacccttgatgttaaaggaagaggaaattac
caggactatttttctcctgaacttctcgtgctctattgttcatcttccttaataatacca
gccattggaatgatcatttactttgctagaagagccaacatgaaagggtcatacagtctt
gtagaagcacagaaatcaaaggtgtag
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