Pseudescherichia vulneris: LMA04_02465
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Entry
LMA04_02465 CDS
T08658
Symbol
nirB
Name
(GenBank) nitrite reductase large subunit NirB
KO
K00361
nitrite reductase [NAD(P)H] [EC:
1.7.1.4
]
Organism
pvj
Pseudescherichia vulneris
Pathway
pvj00910
Nitrogen metabolism
pvj01100
Metabolic pathways
pvj01120
Microbial metabolism in diverse environments
Module
pvj_M00531
Assimilatory nitrate reduction, nitrate => ammonia
pvj_M00615
Nitrate assimilation
Brite
KEGG Orthology (KO) [BR:
pvj00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
LMA04_02465 (nirB)
Enzymes [BR:
pvj01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.1 With NAD+ or NADP+ as acceptor
1.7.1.4 nitrite reductase [NAD(P)H]
LMA04_02465 (nirB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox
Rieske_2
NIR_SIR
Rubredoxin_C
Pyr_redox_3
Fer2_BFD
NIR_SIR_ferr
DAO
GIDA
NAD_binding_8
3HCDH_N
AlaDh_PNT_C
Lycopene_cycl
FAD_binding_3
Amino_oxidase
FAD_oxidored
Trp_halogenase
Pyr_redox_dim
FAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
WAH52939
LinkDB
All DBs
Position
477357..481433
Genome browser
AA seq
1358 aa
AA seq
DB search
MDKPLLVVIGNGMAGVRLVEKLCELAPARYRIVVIGDEAQPAYNRIMLTPVLAGEKSFAD
IVTHDKTWYERYNVTLIAGSPVTAIDCEARTLSVKGQKLGYDRLVMAIGSLPFMPPLPGA
ELSGISGFRNQQDVERILRALTPGQPAVVIGGGVLGVEAAAALALRGMQVTLLHRGPYLM
DQHLDRHAADLLREELKARGIETVLEAETIAYGADESGHVQCVKLHDGRAIPARRVIVAA
GVRPNISLAQAAGLDCARGILVNDQLQTSDPYISAIGECCQIGEQTFGLVAPCWQQAETL
AATLAGVSAPPRIVHDVPLRLKVTGIHLFCAGTLHGEHDAEIHSTFDPFDGHYRRLLIQN
NQLQGVLLWGEISDGPEYVARLGHSQTSLFMPDTPHPISLKEPLSREIARSNVMSKPVLV
MAGHGMVGHHLLQQLVERELHLHYHIIVFAEEHRPAYDRVHLSEYFSGRSAESLSMVESD
FFASTGIELRLGHGIEHIDRHRRFVVDKQGRQTAYDVLVLATGSWPFVPPIPGNDRPGCL
VYRTIDDLEAIQACAQQGRVGVVVGGGLLGLEAANALKHLGLETHVVEFAPRLMGVQLDE
GGAAMLRRKIEALGVQVHTGKETQEIVPGESSQYRMVFADGSHLETDLVLFSAGIRPRDQ
LARECGLEVGPRGGIVIDDQCRTSDPAIFAVGECALWNGQIFGLVAPGYQMARTLAETLA
GSEAAFKGADMSTKLKLLGVEVASVGDAHGRTPGSESYSWVNGPAEIYKKIVVSADRKRL
LGAVLVGDSSEYSTLLQMMLNAMPLPASPEGLILPASAGSAPQALGVAALPGGAQICSCH
NVSKSDICNAVKGGCGDMAGIKSCTKAATGCGGCAALTKQVMEFALSEMGVEVKKDICEH
FAYSRQEIYHLVRVGNIRSFDELISKHGRGHGCEICKPLVGSVLASCWNEYLLKPQHLPL
QDTNDRFFANIQKDGTYSVVPRIPAGEITPDGLIAIGQVAKRYNLYTKITGGQRVDLFGA
RVEQLPEIWQQLVEAGFETGHAYGKSLRTVKSCVGSNWCRYGVQDSTDLALRLENRYKGL
RSPHKIKMAVSGCTRECAEAQSKDVGVIATDKGWNLYVCGNGGMKPRHADLLAQDLSTEA
LIRTVDRFLMFYIRTADRLQRTSTWMDNLEGGMDYLRQVVLEDSLNIADELESEMNAVVA
TYQCEWQTTLAAPDRIALFKSFVNSDEPVRTQQGWVEICDINEIPANAGMAARLTHQQIA
LFHLPDHPQQVFALSNHEPNSDANVLARGLVGDVQGEPVVISPLYKQRFRLQDGRNVDDD
QSALGVWPVKVEGGRVWVQEPPANHIDRPAAMIETVSL
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atggataaaccgctcctggtagttattggcaacggtatggcaggcgtgcggctggtggag
aaactgtgcgagctggccccggcgcgttatcggatcgtggtgattggcgacgaagcgcag
cctgcctataaccggatcatgcttacgccggtgctggcgggtgagaaaagctttgctgac
atcgtgacccacgacaaaacgtggtacgaacgttacaacgtcacgttaattgccggttca
ccagtgacggcgattgactgcgaggcacgcaccctcagcgtcaaagggcagaagctgggt
tacgatcggctggtgatggcgatagggtcgctgccctttatgccgccgctgccaggggcg
gagctgtcgggtatctctggctttcgcaatcagcaggacgtcgagcgcattctacgtgcg
cttacaccggggcaaccggcggttgtgattggcggcggggtacttggcgtcgaggccgcg
gcggcgctggcgctgcgcggtatgcaggttactctgctgcaccgtggaccgtatctgatg
gatcagcatctggatcgccatgcggcagatctcctgcgcgaggaattgaaggcgcgcggt
attgaaacggtgctggaggcggagacgatagcctatggcgccgatgaaagcggccatgtt
cagtgtgtgaagctccacgatgggcgggccattcctgcccgccgggtcatcgttgccgct
ggcgtgcggcctaatatcagcctggcgcaggctgccggactggattgcgcccgcggcatt
ctggttaatgaccagctgcaaacctccgatccctatatctccgcgattggcgaatgctgc
cagatcggtgagcagacctttgggctggtggcgccgtgctggcagcaggctgagacactc
gcggcaacgctggcaggcgtgagcgcaccacccaggatcgtccatgacgtgccgctgcgg
cttaaggtcaccggtatccatcttttctgcgccggcacgctgcacggcgagcatgacgcg
gagatccattccaccttcgatccctttgacgggcactatcgtcgtctgcttatccagaat
aaccagctgcagggcgtactgctatggggagagatcagcgacgggccggaatatgtcgcc
cgtctcggtcactctcaaaccagcctgtttatgcctgacacaccacatcccatttccctg
aaagagccgttatcgcgtgagatagcgaggagcaacgttatgtcaaaacccgttttagtg
atggccggacacggcatggtcggacaccatcttctgcaacagctggtcgagcgcgaactg
caccttcactatcacattattgtcttcgccgaggagcatagaccggcctacgaccgggta
catctctcggaatacttctccgggcgcagcgctgagtcactgtcgatggtagagagtgat
ttctttgcgtcaaccgggattgaactgcgcctcggacacggcattgaacatatcgatcgc
catcgccgttttgtggttgataagcaggggcggcagaccgcctatgacgtgctggtcctg
gcaaccggatcctggccatttgtgccgccgatccccggcaacgacaggccgggctgcctg
gtctatcgcactatcgacgatcttgaggcgattcaggcctgtgcgcagcaggggcgtgtc
ggcgtggttgtcggcggcggcctgctcggtctggaagccgctaacgcactgaagcatctt
ggacttgaaacgcacgtggtagagttcgcgccgcggctgatgggcgtgcagcttgacgaa
ggcggggcggcgatgctgcgtcgtaagattgaagccctcggggtgcaggtgcataccggt
aaagagacccaggagattgttccgggcgagagcagccagtaccggatggttttcgccgac
ggcagccatcttgagaccgatctggtgctcttttctgccgggatccgtccgcgagaccag
ctggcgcgagagtgcggccttgaggttggcccccgcggtgggattgtgattgatgaccag
tgccgcacctccgatccggccatatttgccgttggggagtgcgccctgtggaacggacag
atttttgggctggtggcgccaggttatcagatggcgcgcaccctggcggagacgctggcc
ggcagcgaggcggcctttaaaggtgcggatatgagtaccaagctgaaattgcttggcgtc
gaggtagcatcggtgggcgatgcgcacggccgcacgccgggcagcgaaagctatagctgg
gtgaatgggccggcagagatctacaaaaagatcgtggtatcagcggatcgcaagcgtctg
ctgggcgcggtgctggtgggtgacagcagcgaatacagcacgctgctgcagatgatgctc
aacgctatgccgctgcccgccagtccggaggggctgatcctgcccgccagcgcgggcagt
gcaccgcaggcgctgggtgtcgcggcattgccgggcggggcgcaaatctgctcctgtcat
aacgtcagtaaatccgacatctgcaacgccgtaaaaggcggctgtggcgatatggccggg
ataaagtcctgcaccaaagcggccacgggatgcggcggctgtgcggcgctcactaagcag
gtgatggagtttgcgctgagtgaaatgggcgtcgaggtgaaaaaggatatttgcgagcac
ttcgcttattcacgtcaggagatctatcacctggtgcgcgtaggcaacatccgtagtttc
gatgaactcatcagtaagcacggccgcggccacgggtgtgagatctgtaagccgctggtg
ggttcggtactggcgtcgtgctggaatgagtatctgcttaagccgcagcatctgccgtta
caggatactaacgatcgcttctttgccaacatccagaaagacgggacctactcagtggtg
ccgcgcattcccgccggggagatcacgccggacgggctgatcgctatcggccaggtcgca
aaacgctacaacctctataccaaaattaccggcgggcagcgggtcgatctctttggcgcc
cgggtagaacagctaccggagatctggcagcagctcgtggaggcaggattcgaaaccggc
cacgcctacggcaagtcgctgcggacggtgaagtcctgtgtcggctccaactggtgccgc
tacggcgtacaggactctaccgatctggcgctgcggctggagaaccgctacaaggggctg
cgctcgccgcacaaaattaaaatggccgtctcgggctgcacccgtgaatgcgccgaagcg
caaagcaaagatgtcggcgtcatcgccaccgacaaaggctggaatctctacgtctgcggt
aacggcggcatgaaaccccggcacgcggatctgctggcccaggacctgagcaccgaggcg
ctgatccgcaccgtggatcgcttcctgatgttctatatccgcaccgccgaccgcctgcaa
cgcaccagcacctggatggataatcttgagggaggcatggattacctgcgccaggtggtg
ctggaggatagcctgaatattgccgacgaacttgaaagcgagatgaacgccgtggtggcg
acctaccagtgcgaatggcaaaccacgctggcggctcccgatcgtatcgcgctgtttaaa
tcctttgttaacagcgatgagccagtgcgaacgcagcagggctgggtggagatctgtgat
attaacgagatcccggccaatgccggcatggcggcccggctgacccaccagcagattgcg
ctcttccatctgccggatcacccccagcaggtgttcgcgctcagcaaccacgagccaaat
agcgatgccaacgtgctggctcgcggtttagtgggtgatgtgcagggcgagccggtggtg
atttctcccctctataaacagcgcttccgcttgcaggatgggcgaaacgtagacgatgat
caaagcgcgctcggcgtctggccggtgaaggtggagggtggacgcgtctgggtgcaggag
ccgcctgcgaaccacattgatcgtccagccgccatgattgagacggtgagcctatga
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