Pseudescherichia vulneris: LMA04_18120
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Entry
LMA04_18120 CDS
T08658
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
pvj
Pseudescherichia vulneris
Pathway
pvj00300
Lysine biosynthesis
pvj01100
Metabolic pathways
pvj01120
Microbial metabolism in diverse environments
pvj01230
Biosynthesis of amino acids
Module
pvj_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pvj00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LMA04_18120 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvj01002
]
LMA04_18120 (dapE)
Enzymes [BR:
pvj01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
LMA04_18120 (dapE)
Peptidases and inhibitors [BR:
pvj01002
]
Metallo peptidases
Family M20
LMA04_18120 (dapE)
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Ortholog
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GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Peptidase_M42
Peptidase_M18
Motif
Other DBs
NCBI-ProteinID:
WAH51989
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Position
complement(3798684..3799811)
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AA seq
375 aa
AA seq
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MSCPVIELTQQLIRRPSLSPDDAGCQALMIERLRAIGFTVERMDFGDTQNFWAWRGQGET
LAFAGHTDVVPAGDVDRWINPPFEPTIRDGMLYGRGAADMKGSLAAMVVAAERFVAQHPH
HKGRLAFLITSDEEASATHGTVKVVEALMARNERLDYCLVGEPSSTEVVGDVVKNGRRGS
MTCNLTIHGVQGHVAYPHLADNPVHRAAPMLNELVAIEWDRGNEFFPPTSMQIANIQAGT
GSNNVIPGDLKVQFNFRFSTELTDEAIKARVAALLDKHQLRYSVEWWVSGQPFLTSRGKL
VDAVVKSIAHYNEIEPQLLTTGGTSDGRFIARMGAQVVELGPVNATIHKINECVNAADLQ
LLARMYQRIMERLVA
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgtcatgcccggttattgagctgacccaacagcttattcgccgcccttctctgagtccc
gacgacgcaggatgccaggcgttaatgattgaacgcctgcgcgctatcggctttaccgtt
gaacggatggactttggcgatacgcaaaacttctgggcatggcgcggccagggcgagacg
ctggcgtttgccggccataccgacgtggttcccgctggtgacgttgaccgctggatcaat
ccgccgtttgaacccaccattcgtgacgggatgctgtatggtcgcggcgcggccgacatg
aaaggctccctggcagcgatggtcgtggccgccgagcgcttcgtagctcagcatccgcac
cacaaaggtcgactggctttcctgatcacctccgacgaagaggccagcgccacgcacggt
acggtcaaggtcgtagaggcgctgatggcgcgtaacgaacgcctcgactactgcctggta
ggtgagccctccagtaccgaagtcgtgggcgacgtggtaaaaaacgggcgccgcggttcg
atgacctgcaacctgaccattcacggcgtgcagggccacgtggcctatccgcacctggcg
gacaacccggtacaccgcgcagccccgatgcttaacgaactggtggccatcgagtgggat
cggggtaacgaatttttcccgcccaccagcatgcagatcgccaatattcaggccggtacc
ggcagcaacaacgtgatccccggcgacctgaaggtgcagtttaacttccgcttcagcacc
gagcttaccgacgaggcgatcaaggcccgcgtggcagccttgctggataaacatcagctg
cgctacagcgttgagtggtgggtttccggccagccgttcctgacctcgcgcggcaagctg
gtggatgcggtagtgaagtcgattgcgcactataatgaaattgaaccgcagctgttaacc
acgggcgggacctcggacgggcggtttatcgcgcggatgggtgcgcaagtggtcgagctt
gggccggtgaatgcgaccattcataaaatcaacgaatgcgtaaacgccgccgatctgcag
ctgctggcccgtatgtatcaacgcattatggaacggctcgttgcataa
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