Pseudescherichia vulneris: LMA04_18330
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Entry
LMA04_18330 CDS
T08658
Name
(GenBank) sensor domain-containing phosphodiesterase
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
pvj
Pseudescherichia vulneris
Brite
KEGG Orthology (KO) [BR:
pvj00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
LMA04_18330
Enzymes [BR:
pvj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
LMA04_18330
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Gene cluster
GFIT
Motif
Pfam:
EAL
MASE1
GGDEF
DUF1616
Motif
Other DBs
NCBI-ProteinID:
WAH52022
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All DBs
Position
3838749..3840932
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AA seq
727 aa
AA seq
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MKMKIYNHVKTFLIALIICIAVVPVSRFISPRAQVDASEIFLAWLPLSVALAIIFLFGRR
AIVPLVAGFALVYEWLFDLTPQQTAVYLFCFFFPLLASCAVVRWQLGKRWRHGLPCRDMG
VRTVWLAFVAPASIKAAMYVAGSMQAFPAQLARFFDTSSVIYSIIDIQSLICAALIFTMM
FYYPLRMVVNPRYGRTLWRKSVKPFLSRRRRNFTLGWLLTLTLFLIVVCSPFQSDYIAGY
LVPIIFILFTLGIGKLSPPLIGLSWAVTALMLLANNKNFLQGVYTEYSMAFVLSVLISFT
ICILYMAAIYRRSEWLKRAWKAQALTDPLTGLPNLRALEQQLEKHTHRVVCCLHISNLEF
LSRHYGMMMRVQCKRSITRELQPLLMRNERVYQLPGSELLLLLNGAEPTARLQHMVDYLS
GRKIFWHHTAMDIEFGASWGIIEGAGEIFHQTLGQLSWLSEQACSTSHVLALTQSLETVC
DHTTERVLLLNRVKRALEEEGLLLYAQPIQNADGVGYHEVLTRLAVEGEILTPDRFLPVI
AQFNLSIRFDMQVLETLLRWLRAHPVPGTQARFSVNLMPLTLMQKESATQIMALFKSYGV
APQCVIIEITEEQAFSNSETSMHNIQRLQNYGFKIAIDDFGTGYANFERLKRLHADIVKI
DGCFVKDILTDSLDAMIVKSICFMAKAKSLTVVAEYVETEEQRDLLLSLGVDYLQGYLLG
KPEKLAD
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgaaaatatacaatcatgtgaaaacgtttttaattgcgttaataatatgtata
gcagttgtcccggtttcccgttttatttcccctcgagcccaggtggatgcaagcgaaatc
tttctggcgtggctgccgctcagcgtagcgctggcgataattttcctatttggccgccgg
gctatcgtgccgctggtggcaggctttgcgctggtatatgagtggctgtttgatttaacc
ccgcagcaaaccgctgtttatcttttttgctttttctttcctctcctggcgtcgtgcgcc
gttgtacgctggcagctaggcaaacgctggcgacacggtttgccctgccgggatatgggc
gtgcgcaccgtctggttggcgtttgttgctccagccagcattaaggcagccatgtacgtt
gcgggcagcatgcaggcatttcctgctcagctcgccaggttttttgatacgagttcggtt
atttacagcattattgatattcagagcctgatttgtgcggcgctgatttttaccatgatg
ttttattatccgctgcgtatggtagtcaatcctcgctatggccggacgctgtggcgaaaa
agcgttaaaccttttttatcgcggcgaagaagaaatttcactttaggctggctactgaca
ttaaccctttttcttatcgtcgtctgctcaccctttcaatctgactatatagccggttac
ctggtcccgatcatttttattttatttaccttagggatcggtaagctaagcccgccgcta
attggcctgagctgggccgtgaccgcgctaatgctgctggccaataacaaaaatttcttg
cagggtgtttacacagagtactcgatggcttttgtactgtcggtgctgatttcgtttacc
atctgcattctctatatggctgctatctaccggcgcagcgagtggcttaagcgcgcgtgg
aaagcgcaggcgctcaccgatccgcttactggcctgccgaatttgcgcgcccttgagcag
cagctggagaagcatacccatcgggtggtctgctgcctgcacatcagtaatctggagttt
ctcagccgccactacggcatgatgatgcgcgtgcagtgcaagcgcagcatcacccgtgag
ctgcagccgctgctgatgagaaatgagagggtgtaccagctgccgggaagcgagctgctg
ctgctgctcaacggcgccgagccgacggcgcggcttcaacatatggtggactaccttagc
ggaagaaaaattttctggcaccacaccgcaatggatatcgaatttggcgcttcctggggg
attattgaaggcgctggggagatctttcaccagacgctgggacagctgagctggctctct
gagcaggcctgttcaacctcgcacgtgctggccctgacccagagtcttgaaaccgtgtgc
gaccacactaccgagcgcgtgctgctgcttaaccgtgtgaagcgtgcgctggaggaggag
gggctactgctctatgcccagccgatccagaatgcggacggggtggggtaccatgaggtg
ctgacccgcctcgccgtggagggtgaaattctgacccctgaccgttttctgccggtcatt
gcccagtttaacctgagcatccgctttgatatgcaggtgctggagacgctgctgcgctgg
ctgcgcgcacatccggttccaggtacccaggcgcgtttctctgtcaacctgatgccgctg
accctgatgcaaaaggagtcggccacgcagattatggccctgtttaaaagctatggcgtt
gcgccccagtgcgtgattattgagataaccgaagagcaggctttttccaattcggaaacc
agcatgcacaacattcagcgtctgcaaaactacggtttcaagattgcaatcgatgatttt
gggaccggctacgctaactttgaacgcctgaagcgtctgcatgctgacattgtgaagatc
gacggctgcttcgtgaaggatattctcaccgactctctggacgcgatgatcgtgaagtcc
atctgctttatggcgaaagccaaatccctgacggtggtggcggagtatgtagagaccgag
gagcagcgcgacctgctgctctcgctgggggtggactacctgcagggctatctgttgggt
aaacccgagaagctggcggattag
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