Penaeus vannamei (Pacific white shrimp): 113830096
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Entry
113830096 CDS
T06111
Name
(RefSeq) geranylgeranyl pyrophosphate synthase-like
KO
K00804
geranylgeranyl diphosphate synthase, type III [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm00900
Terpenoid backbone biosynthesis
pvm01100
Metabolic pathways
Module
pvm_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
113830096
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pvm01006
]
113830096
Enzymes [BR:
pvm01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
113830096
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
113830096
2.5.1.29 geranylgeranyl diphosphate synthase
113830096
Prenyltransferases [BR:
pvm01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
113830096
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Terpene_syn_C_2
Motif
Other DBs
NCBI-GeneID:
113830096
NCBI-ProteinID:
XP_027239086
LinkDB
All DBs
Position
Unknown
AA seq
313 aa
AA seq
DB search
MESNGNNSGFNMESLCSASGDKKQDQILLQPFTYVLQVPGKMIRGKLAQAFNYWMRIPED
KLMVISEVIHMLHNASLLIDDIEDNSVLRRGIPVAHSIYGVASTINSANYVYFLGLEKVL
ALNHPKATTVFCEQLLELHRGQGMEIYWRDSFTCPSEEEYRQMTIRKTGGLFGLAIRLMQ
LFSQVQDDFSRITGILGLYFQIRDDYANLCMKEYSDSKSYCEDLTEGKFSFPVIHAIKTH
PDDQQVINIIRQRPKDLEVKRYCVSLLEKFGSLEHTKETMKKLEAEAREEIVRLGGNPHL
ERVLDELRNWESL
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggagagcaacggtaacaactccggtttcaacatggagtccttatgtagtgctagcggg
gacaagaaacaggaccaaatccttttgcaaccctttacctatgtcctccaagtcccaggg
aagatgatcagagggaagttagcccaagccttcaattactggatgagaatacctgaggat
aagctaatggtcatatctgaggttatccacatgttgcataatgctagccttttaatagat
gacatagaggacaatagtgttttacgaagaggtattcctgtggcacatagtatatacgga
gttgcgtcaaccatcaactcggctaattatgtttattttcttggcctagagaaagttctg
gccctgaatcatccaaaggcgactacagtgttttgtgagcagctgttggagctccatcga
gggcagggaatggagatctattggagggattcatttacttgtccatcggaggaagaatac
agacaaatgaccatacgaaaaacgggtggattatttggcttagctattcgattaatgcaa
cttttcagtcaagtccaagatgacttttcaagaatcacaggaattttgggactgtacttt
cagattcgtgatgactatgcaaatctttgcatgaaagagtacagtgacagtaagagttac
tgtgaggatttgacagaaggcaaattcagttttccagtcatccatgccattaaaacccac
cctgatgaccagcaagttattaacatcatccgccagagacccaaagacctggaggtgaaa
cgatattgcgtgtcccttctagagaagtttggttccctcgagcacaccaaagaaaccatg
aaaaaactggaggctgaagcacgagaggagattgtcaggctagggggcaacccccacttg
gagagagtgctggatgaactccggaattgggagagcctttaa
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