Pteropus vampyrus (large flying fox): 105292907
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Entry
105292907 CDS
T07815
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
pvp
Pteropus vampyrus (large flying fox)
Pathway
pvp01524
Platinum drug resistance
pvp03430
Mismatch repair
pvp05200
Pathways in cancer
pvp05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
pvp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
105292907 (MSH6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
105292907 (MSH6)
09162 Cancer: specific types
05210 Colorectal cancer
105292907 (MSH6)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
105292907 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvp03400
]
105292907 (MSH6)
DNA repair and recombination proteins [BR:
pvp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
105292907 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
HORMA
MUM1-like_PWWP
WPP
Motif
Other DBs
NCBI-GeneID:
105292907
NCBI-ProteinID:
XP_011359613
UniProt:
A0A6P3QFU7
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All DBs
Position
Unknown
AA seq
1360 aa
AA seq
DB search
MSRQSTLYSFFPKSPALNKANKAPVRASGEGGATAATGASPSPGGDAAWSEAGPGPGPLE
SSASPPEARNLNGGLRRSAAPSVASSSCDFSPGDLVWAKMEGYPWWPCLVYNHPFDGTFI
REKGKCARVHVQFFDDSPTRGWVSRRLLKPYTGSKSKEAQKGGHFYSAKPEILRAMQRAD
EALNKDKIKRLELAVCDEPSEPEEEEMEVGATYASDKSEEDNEIESEDEVRPKVQGSRRS
SRQIKKRRVISDSESDIGGSDVEFKPDAKEEGSSDEISSGMGDSDSEGLQSSVKVAPKRK
RMVTGNGSLKKKSSRKEMPPATKRSSGISSETKSTLSAFSAPQNSESQAHVSGGCDDSSR
PTVWYHETLEWLKDGKRRDMHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNF
DLVIFYKVGKFYELYHMDALVGVNELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVA
RVEQTETPEMMEARCRKMAHISKHDKVVRREICRVITKGTQTYSVLEGDPSENYSKYLLS
LKEKEEDTSGHTRVYGVCFVDASLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNL
STETKMILKGSLSSSLQEGLIPGSQFWDAAKTLRTLLEEGYFTEKLNEGNGVMLPQVLKS
MTSESDSLGLTPGEKSELALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDMVSAIR
PGAVFAKVNQRMVLDSVTLNNLEIFLNGTNGTTEGTLLEKIDTCHTPFGKRLLKQWLCAP
LCNPYAINDRLDAIEDLMVVPDKISEVVDLLKKLPDLERLLSKIHNVGSPLKSQNHPDSR
AIMYEETTYSKKKIIDFLSALEGFKVICKIIEIMEEVVDDFKSKILKQIVTMQTKNPEGH
FPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEKQRSR
IGCRSIVYWGIGRNRYQLEIPENFITHNLPEEYELKSTKKGCKRYWTKTIEKKLANLINA
EERRDVSLKDCMRRLFYNFDKNYKDWQAAVECITVLDVLLCLANYSRGGDGPMCRPVILL
PKEDTPVFLDLKGSRHPCISKTFFGDDFIPNDILIGCEEEEEENGRAYCVLVTGPNMGGK
STLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASI
LTHATAHSLVLVDELGRGTATFDGTAIANAVVKELAENIKCRTLFSTHYHSLVEDYSQNV
AVRLGHMACMVENECEDPSQETITFLYKFIKGACPKSYGFNAARVANLPEEVIQKGHRKA
REFEKMTHSLRLFREVCLASERSTVDAETVHKLLASIEEL
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacagagcacgctgtatagcttcttccccaagtctccagcgctgaataaagcc
aacaaggccccggtcagggcctcaggtgaaggcggcgccactgctgccactggggcctcc
ccttcccccggcggggatgcagcctggagcgaggccgggcctgggcccggtcccttggag
agctccgcgtcgcctcccgaggctaggaacctcaacggagggctgcggaggtcggcagcg
ccttcggttgcctccagttcttgtgacttctcaccaggtgatttggtttgggccaagatg
gagggttacccctggtggccttgcctggtttacaaccacccttttgatggaacattcatc
cgtgagaaagggaagtgtgcccgagttcatgtacagttttttgatgacagcccaacaagg
ggctgggttagcagaaggctcttaaagccatatacaggttcaaaatcaaaggaagcccag
aaaggaggtcatttttacagtgcaaagcctgaaatactcagagcaatgcaacgtgcagat
gaagccttgaataaagacaagattaagaggcttgaattggcagtctgtgatgaaccctca
gaaccagaggaggaagaaatggaggtaggtgcaacttatgcatcagataagagtgaagaa
gataatgaaattgagagtgaagatgaagtgcggcctaaagtgcaaggatctaggcgaagt
agccgccagattaaaaaacggagagtcatatcagactctgagagtgacattggtggctct
gatgtggaatttaagccagatgctaaggaggaaggaagcagtgatgaaataagcagtgga
atgggggacagtgacagtgaaggcctgcagagctctgtcaaagttgctccaaagaggaag
agaatggtgactggaaatggctctctcaaaaagaaaagttcaaggaaagaaatgccccca
gccaccaaacgatcaagtggcatttcatcagaaaccaagagtactttgagtgctttctct
gcccctcagaattctgaatcccaggcccacgttagtggaggatgtgatgatagtagtcgc
cccactgtctggtatcatgaaactttagaatggcttaaggacggaaaaagaagagatatg
cataggaggcgacccgatcatcctgattttgatgcatctacactgtatgtgcctgaggat
ttccttaattcctgtactcctgggatgaggaagtggtggcagattaagtctcagaacttt
gatcttgtcatattttataaggtggggaagttttatgagctgtaccacatggatgctctt
gttggagtcaacgaactagggcttgtattcatgaaaggcaactgggcccattctggtttc
cctgaaattgcttttggccgatattcggattctctggtccagaagggctataaagtagca
cgagtggaacagactgagaccccagaaatgatggaggcacgatgccgaaagatggcacat
atatctaaacatgataaagtggtgaggagggagatttgtagggtcattaccaagggtaca
cagacatacagtgtgctggaaggtgacccctctgagaactacagtaagtatcttcttagc
ctcaaagaaaaagaggaagatacttctggccacactcgtgtatatggtgtatgctttgtt
gatgcctcactgggaaagtttttcataggtcagttttcagatgatcgccattgttcaagg
tttaggactctagtggcacattatcctccggtacaagtgctgtttgagaaaggaaatctc
tcaacagaaacaaagatgattttgaagggttcattatcttcttctcttcaggaaggtctt
atcccaggctcccagttttgggatgcagccaagactttgagaactctccttgaagaagga
tattttacggaaaagttaaatgagggcaatggggtgatgttaccccaagtgcttaaaagt
atgacttcagagtctgattctctaggattgacaccaggagagaaaagtgaattggccctc
tctgcgctaggtggttgtgtcttctacctcaaaaaatgccttattgatcaggagctttta
tcaatggctaattttgaagaatatattcccttggattctgacatggtcagtgctataaga
cctggtgctgtctttgctaaagtcaatcaacgaatggtgctagattctgtgacattaaac
aacttggagatttttttgaatggaacaaatggtactaccgaaggtaccttactagaaaag
attgatacttgccatactccttttggtaagcggctcctaaagcaatggctttgtgcccca
ttgtgtaatccttatgctatcaatgatcgtctagatgctatagaagacctgatggttgtg
cctgacaaaatctctgaggttgtagaccttttaaagaagcttccagaccttgagaggcta
ctgagtaaaattcataatgttgggtctcctctgaaaagccagaaccacccagatagcagg
gctataatgtatgaagaaactacatacagcaaaaaaaagattattgattttctttctgct
ctggaaggattcaaagtaatatgtaaaattatagagattatggaagaagttgtcgatgac
tttaagtctaaaatccttaagcagatcgttactatgcagacgaaaaatcctgaaggccat
tttcctgatttgactgtagaactaaaccgatgggatacagcctttgaccatgagaaggct
cgaaagactggactgattactcccaaagcaggatttgactctgattatgaccaagctctt
gctgacataagagaaaacgaacagagcctcctggaatacttggagaaacagcgcagtaga
attggctgtaggagcattgtctactgggggattggtaggaatcgttaccagttggaaatt
ccagaaaatttcatcacccataatttgccagaagaatatgagttgaaatctaccaaaaaa
ggctgtaaacgatattggaccaaaactattgagaagaagttggctaatctgataaatgct
gaagaacggagagacgtatcattgaaggactgcatgcggcgactattctataactttgat
aaaaattacaaggactggcaggctgccgtagagtgcatcacagtgttggatgtcttattg
tgcctggctaactacagtcgagggggtgatggtcctatgtgtcgtccagtaattcttttg
ccaaaagaagacactcctgtcttcttagaccttaaaggatcacgccatccctgcatttca
aagaccttttttggagatgactttattcctaatgacattctaataggctgtgaggaagag
gaggaggaaaatggcagagcttattgtgtgcttgttactggaccaaatatggggggcaag
tctacactcatgagacaggctggtctattagctgtcatggcccagatgggttgttatgta
cctgctgaagtatgtaggctcacaccaattgatagagtgtttactagacttggtgcctca
gacagaataatgtcaggtgaaagtacattttttgttgaattgagtgaaactgccagtata
cttacgcatgcaacagcacattctctggtgcttgtggatgaattaggaagaggtactgca
acatttgatgggacagcaattgcaaatgcagttgttaaagaacttgctgagaatataaag
tgtcgtacattgttttctacccactatcattcattagttgaagattattctcaaaatgtt
gcagtacgcctaggacacatggcatgcatggtagaaaatgaatgtgaagatcccagccag
gagactattaccttcctttataagtttatcaagggagcttgtcctaaaagctatggcttt
aatgcagcaagggttgctaatcttccagaggaggttattcaaaagggacacagaaaagca
agagaatttgagaagatgactcattcactgcgattatttcgggaagtttgtctggctagt
gaaaggtcgactgtagatgcagaaactgtccataagttgctggcttcgattgaggaatta
tag
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integrated database retrieval system